Transcript Information: S_Transcript_182858.p1


Annotated TAIR IDAT1G51580.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19125612-19128102 | Forward length=621
E-Value1E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.491816906309
Replicate 211.06355627957
Replicate 312.071120264631
Condition 2: 8 Hour
Replicate 112.40354334772
Replicate 212.392569217341
Replicate 311.061868436404
Condition 3: 24 Hour
Replicate 110.763222477873
Replicate 29.5809115993305
Replicate 310.809447602193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_182858.p1 GENE.S_Transcript_182858~~S_Transcript_182858.p1 ORF type:complete len:686 (-),score=163.95,KH_1|PF00013.25|8.9e-14,KH_1|PF00013.25|7.7e-12,KH_1|PF00013.25|8.8e-10,KH_1|PF00013.25|5.4e-12,KH_1|PF00013.25|4.2e-12,KH_3|PF13014.2|1.6e-11,KH_3|PF13014.2|2.2e-09,KH_3|PF13014.2|1.7e-06,KH_3|PF13014.2|1.1e-08,KH_3|PF13014.2|0.00038,KH_2|PF07650.13|0.048,KH_2|PF07650.13|0.016,KH_2|PF07650.13|0.039,KH_2|PF07650.13|0.015,KH_2|PF07650.13|9.4e+02,KH_4|PF13083.2|1.4,KH_4|PF13083.2|4.2,KH_4|PF13083.2|0.02,KH_4|PF13083.2|1.2,KH_5|PF13184.2|0.26,KH_5|PF13184.2|1.3e+04,KH_5|PF13184.2|15,KH_5|PF13184.2|14,KH_5|PF13184.2|12 S_Transcript_182858:25-2082(-)
ATGTCATCTTTAACACCTTCTAAGAGACACCATAATAGAAACTCTAAGGAGTCAAATGGGAAAAAGCTTCAAAAATCAGCTAGCCGTGAATCACAAAAACAGCCTAAGAAAAACTCGTTGGGGAGTGCTGTTTTTCGTGTACTTTATCCGTCCTCAAAAATTGGAAGTGTAATTGGAAAAGGGGGTAATATCATATCACAAATACGGCAAGAAACCGGTGCTAAGGTCAGAGTTGATGATCCTGTTCCTGGATGTGATGAGAGGGTGATTTTTGTTATGGGTCCTGATAAGAATGCCGAGAGCAGCAATGAACAAATGAAAGGTGACAATGGGAACTCTAATTCAGAAGATCACAATGAGATTAATGTGGAGAAGGAAGCTCTTCTAAATGCTGAAGATACACATCTTGATAATGCAAAATCCTTTGTTCAGAAGGCTTTGTTGCGTGTTTTTGAAAAAATTCTTGAAGGAGAAGAGGAGAATAAAGGTAGTAATGAAGAAAATAATGGATCTGCAACAGTCAATTTCAGTTTGCTTGTGCTTTCCAGTCAAGTGGGCAGCCTTTTGGGGAAAGGCGGTTCTGCGATCAAACATATGTCTGCTAAAAGTGGTGCCCAGATTCAAGTTCTTCCAAGAGACAATCTCCCTCAGTGTGCCTCCTCTGCTGACGAAGTTGTCCAGATCAGTGGTGTAGCAGATGCCGTAAAGGAAGCAATCAAGTCTGTTTCAGGTGAGATTATGGAAAATCCACCTTGTGATCATGACTCAGTTCCTTTTAATCCCTCTGGATCCTCATCTCATTCACACAGCCATCCTGTTCCAAGGCTCGAGTCCAACTCCTTCAGATCCTTGCCCCCTCAGGGGGCTTCTTTTAGTGGTGGATTTCGTGATAGTGGCGATTTTCATTCAAGTGTTCCTCCATTGTTTCCCAATTTCCGTGAGAACTTCAAACATACTCGAATGGATGTTTCTGATGGCTTAACCTTTCGGTTAATTTGCCCTGATGAGAGGGTAGGTGGTGTCATTGGGAAAGGAGGGACTATAGTGAAGTCTCTCCAGCATGAAACAAGGTGTGAGATTAAAGTTCTTGAAGGCACTTCTGATGGAGAGGAACGTATAATAGCTGTGTCTGGCCCAGCGCACCCAGATGATAGGATCTCTCCCATACAGGACGCAGTTCTTCGTGTACAGCACCGGATAGCCAAAGCAATACCTGATAGCAAGGAAAAGGATGTAACTGCCAAGCTTCTTATCTCCTCCAATCAAATTGGCTGCCTTCTTGGCAAGGGGGGCTCTATAATTGCTGAGATGCGGAAGGCAACCGGAGCTTATATTCGTATATTGGGGAAGGATCAGATCCCAAAGTGTGCATTGGAAAATGAAGAAGTAGTTCAGGTGAATGGAGAACTAGAGGTTGTCCAAGAGGCAGTTCTACAGATAACCACTAGACTACAGCATCATCTCTTCCGTGATGTGTTTCCTTCTGTTAACCATCCTGCAAACCCTGCATTCTCGGATCGAGTGCCCCCTCTTCCGTCATTAATGGGAAGAAGAGAACTCTCTCCACCTGGAATGTTTCCCAAATTAGGTCCATCATTCAGAAACTTCGATTCCATTGGTGGTCCCCCACATGGCGGATTTCATCCACATGATGATCATCCTCCATTTATGCATGATATCCGTAGACAGGGAGTTGCTCCCTTTCCTGAAAGACCCTGGCATCCTCAGTTAATTGAAGGTGGTTCAATGGGTTTGTTGGGCTATGCTGGAGCCCCACAGAGGCGGATGGCTGGATTTGGAGGCGGAAGCCAAGAGGCGGTGATCACAAATACAACTGTGGAAGTAGTAGTCCCTAGTTCTATTGTACCATCAATATATGGAGAAAATGGTGGATGCTTGAGACAAATTCGCCAGATATCTGATGCAAGAATTACAATAACTGATCCAAAGCCTGGTACCCCTGAAACTATCATCATCATCTCTGGCACACCTGAGCAGACTCACGCGGCACAGAGTCTTATTCAAGCGTTTGTGATGATTGAAAATGAATCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_182858.p1 GENE.S_Transcript_182858~~S_Transcript_182858.p1 ORF type:complete len:686 (-),score=163.95,KH_1|PF00013.25|8.9e-14,KH_1|PF00013.25|7.7e-12,KH_1|PF00013.25|8.8e-10,KH_1|PF00013.25|5.4e-12,KH_1|PF00013.25|4.2e-12,KH_3|PF13014.2|1.6e-11,KH_3|PF13014.2|2.2e-09,KH_3|PF13014.2|1.7e-06,KH_3|PF13014.2|1.1e-08,KH_3|PF13014.2|0.00038,KH_2|PF07650.13|0.048,KH_2|PF07650.13|0.016,KH_2|PF07650.13|0.039,KH_2|PF07650.13|0.015,KH_2|PF07650.13|9.4e+02,KH_4|PF13083.2|1.4,KH_4|PF13083.2|4.2,KH_4|PF13083.2|0.02,KH_4|PF13083.2|1.2,KH_5|PF13184.2|0.26,KH_5|PF13184.2|1.3e+04,KH_5|PF13184.2|15,KH_5|PF13184.2|14,KH_5|PF13184.2|12 S_Transcript_182858:25-2082(-)
MSSLTPSKRHHNRNSKESNGKKLQKSASRESQKQPKKNSLGSAVFRVLYPSSKIGSVIGKGGNIISQIRQETGAKVRVDDPVPGCDERVIFVMGPDKNAESSNEQMKGDNGNSNSEDHNEINVEKEALLNAEDTHLDNAKSFVQKALLRVFEKILEGEEENKGSNEENNGSATVNFSLLVLSSQVGSLLGKGGSAIKHMSAKSGAQIQVLPRDNLPQCASSADEVVQISGVADAVKEAIKSVSGEIMENPPCDHDSVPFNPSGSSSHSHSHPVPRLESNSFRSLPPQGASFSGGFRDSGDFHSSVPPLFPNFRENFKHTRMDVSDGLTFRLICPDERVGGVIGKGGTIVKSLQHETRCEIKVLEGTSDGEERIIAVSGPAHPDDRISPIQDAVLRVQHRIAKAIPDSKEKDVTAKLLISSNQIGCLLGKGGSIIAEMRKATGAYIRILGKDQIPKCALENEEVVQVNGELEVVQEAVLQITTRLQHHLFRDVFPSVNHPANPAFSDRVPPLPSLMGRRELSPPGMFPKLGPSFRNFDSIGGPPHGGFHPHDDHPPFMHDIRRQGVAPFPERPWHPQLIEGGSMGLLGYAGAPQRRMAGFGGGSQEAVITNTTVEVVVPSSIVPSIYGENGGCLRQIRQISDARITITDPKPGTPETIIIISGTPEQTHAAQSLIQAFVMIENESS*

Click here to download the sequence:
Link to NCBI Protein BLAST