Transcript Information: S_Transcript_18289.p1


Annotated TAIR IDAT4G30950.1
Annotated Gene Namefatty acid desaturase 6
Annotated Gene Symbol(s)FAD6, FADC, SFD4
Annotation TypeOrtholog
Chromosome Positionchr4:15057278-15059673 | Reverse length=448
E-Value1.2E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1174.21550588316
Replicate 2198.56510601763
Replicate 3205.63244505548
Condition 2: 8 Hour
Replicate 131.236529869809
Replicate 230.551863781124
Replicate 329.814015923267
Condition 3: 24 Hour
Replicate 1147.5251382867
Replicate 2159.14588393259
Replicate 3170.83212895536


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18289.p1 GENE.S_Transcript_18289~~S_Transcript_18289.p1 ORF type:complete len:454 (+),score=56.67,FA_desaturase|PF00487.20|5.4e-28 S_Transcript_18289:444-1805(+)
ATGGCTTCCACTTCCAGGCTTGCACATTCTTTGTGCCATGTCAAGGGAATCCATCAACCACCAACCATTCAACTTTCTCCAATTCATGCTTCTGGAGGCGTATCTTGCATAAACTGGCAGAAGCCATGCTTGAAAAAGTTAGGGAATGCAAAACTAGGCCATCCTCGATGGAATTGGATGGTTACAAGTAAAAGCTCAAATTTGGTGCCGGCAGTAGCAGTCCCAACTGCACCGACTACGCCCTCTCCCTCAATAGATGATCCCGAATACTTGAAACAGCTAGCAGAAATATATGGTTTCCAGCAAATTGGGGAACCGCTTCCAGATGACATTACTCTGAGGAATATCATCACTTCTCTTCCGAAGAAGGTGTTTGAGATTGATGACTTGAAAGCATGGGGAACTGTGCTAATAAGTGTAACTTCTTATGCATTGGGCATCTTTATGATTGCAAAAGCCCCTTGGTACTTGCTTCCTCTTGCTTGGGCTTGGACAGGCACTGCTATCACTGGGTTCTTTGTGATAGGACATGATTGTGCGCACAAATCATTTTCAAGGAATAAGCTACTGGAAGACATTGTTGGAACTCTTGCATTCATGCCACTGATTTATCCTTATGAACCTTGGCGATTCAAGCATGACCAACATCATGCGAAAACAAATATGTTGTTTGAGGATACAGCTTGGCATCCAATCTGGAAAGATGATATAGATTCATCTCCTGCCTTGCGTAAAGCTCTGATATTTGGTTATGGTCCTCTTCGTCCTTGGATGTCAATAGCCCACTGGTTAGTTTGGCATTTCAATTTAAAGAAGTTCAGACCAAGTGAAGTTAATCGCGTTCTTATAAGCCTGGGTGCCGTTTTTTCATTTATGGCCATTGGTTGGCCTCTGATAATATATAAAACGGGCATAGTAGGATGGATCAAATTTTGGCTAATGCCATGGTTGGGCTACCATTTCTGGATGAGTACTTTCACAATAGTCCACCATACAGCACCTCATATTCCTTTCAAGGATTCAAGTGAGTGGAATGCAGCTCAAGCCCAGCTTAATGGAACAGTTCATTGCGACTACCCACGCTGGATAGAGATATTATGCCATCATATTAATGTGCATATTCCTCACCATATCTCTCCAAAAATACCAAGTTACAATTTGAAAGCTGCTCAGCAGTCCCTCGATGAAAACTGGGGAAAGTATCTCAACAAGGCTAAATGGAATTGGCGTCTGATGAGAACTATAATGACAACATGCCATATCTATGATAAGGAAGCAAATTATGTCTCCTTTGAGGACGTTAGCCTTGAAGAGTCGCAACCTATATCATTCCTTAAGATGGTAATGCCTGATTATGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18289.p1 GENE.S_Transcript_18289~~S_Transcript_18289.p1 ORF type:complete len:454 (+),score=56.67,FA_desaturase|PF00487.20|5.4e-28 S_Transcript_18289:444-1805(+)
MASTSRLAHSLCHVKGIHQPPTIQLSPIHASGGVSCINWQKPCLKKLGNAKLGHPRWNWMVTSKSSNLVPAVAVPTAPTTPSPSIDDPEYLKQLAEIYGFQQIGEPLPDDITLRNIITSLPKKVFEIDDLKAWGTVLISVTSYALGIFMIAKAPWYLLPLAWAWTGTAITGFFVIGHDCAHKSFSRNKLLEDIVGTLAFMPLIYPYEPWRFKHDQHHAKTNMLFEDTAWHPIWKDDIDSSPALRKALIFGYGPLRPWMSIAHWLVWHFNLKKFRPSEVNRVLISLGAVFSFMAIGWPLIIYKTGIVGWIKFWLMPWLGYHFWMSTFTIVHHTAPHIPFKDSSEWNAAQAQLNGTVHCDYPRWIEILCHHINVHIPHHISPKIPSYNLKAAQQSLDENWGKYLNKAKWNWRLMRTIMTTCHIYDKEANYVSFEDVSLEESQPISFLKMVMPDYA*

Click here to download the sequence:
Link to NCBI Protein BLAST