Transcript Information: S_Transcript_182907.p1


Annotated TAIR IDAT5G17190.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5652310-5652702 | Forward length=130
E-Value1.6E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.683378844579
Replicate 237.856371153331
Replicate 330.939453429865
Condition 2: 8 Hour
Replicate 142.184651884165
Replicate 238.019917633634
Replicate 342.981135334635
Condition 3: 24 Hour
Replicate 139.869896644035
Replicate 238.268403153505
Replicate 334.318519436469


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_182907.p1 GENE.S_Transcript_182907~~S_Transcript_182907.p1 ORF type:5prime_partial len:183 (+),score=10.21 S_Transcript_182907:2-550(+)
ATCTCGCGTGGAAAAAGAATACCAGAACGTGTGTCCTGCTCTAATTATATTCCCGAAGCGTTAAAATCTTTCCTCTCCTTCCACCTCTTTCTCTCTCATTTCCCAGACCCCAGATCTAACCTCCTCCTCTCTTCTCCTCTCAAATTCTCATCAATGGCGTTAGAATGGGTGGTACTCGGCTACGCAGCAGGTGCAGAGGCAATAATGGTCCTTCTATTAACCCTCCCAGGTCTCGATGGTCTTCGCAAGGGTTTGATCGTGGTCACTCGTAACCTCCTCAAACCCTTCCTATCAATAGTCCCCTTTTGCTTGTTCCTTCTTATGGATATTTACTGGAAGTACGAGACTCGTCCGAGTTGTGAGTCCGATTCTTGTACCCCTTCCGAGTTCCTTCGCCATCAGAAATCCATCATGAAGAGCCAGCGTAATGCTCTTCTTATCGCTGCTGCTCTCGTCTTCTACTGGATCCTTTACTCTGTCACTGGCTTGGTCGTCAAGATTGAGCAGCTCAATCAGCGCATTGACAGGTTGAAGAGCCGTGCCGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_182907.p1 GENE.S_Transcript_182907~~S_Transcript_182907.p1 ORF type:5prime_partial len:183 (+),score=10.21 S_Transcript_182907:2-550(+)
ISRGKRIPERVSCSNYIPEALKSFLSFHLFLSHFPDPRSNLLLSSPLKFSSMALEWVVLGYAAGAEAIMVLLLTLPGLDGLRKGLIVVTRNLLKPFLSIVPFCLFLLMDIYWKYETRPSCESDSCTPSEFLRHQKSIMKSQRNALLIAAALVFYWILYSVTGLVVKIEQLNQRIDRLKSRAD*

Click here to download the sequence:
Link to NCBI Protein BLAST