Transcript Information: S_Transcript_182910.p1


Annotated TAIR IDAT1G08540.1
Annotated Gene NameRNApolymerase sigma subunit 2
Annotated Gene Symbol(s)SIGB, SIG1, SIG2, SIGA, ATSIG1, ABC1, ATSIG2
Annotation TypeOrtholog
Chromosome Positionchr1:2703461-2706696 | Forward length=572
E-Value5.3E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3266251543976
Replicate 23.5852033030962
Replicate 30
Condition 2: 8 Hour
Replicate 12.9322411686058
Replicate 21.3982405399829
Replicate 32.9309290456849
Condition 3: 24 Hour
Replicate 14.3689766981188
Replicate 20.56659528940868
Replicate 32.2069288854477


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_182910.p1 GENE.S_Transcript_182910~~S_Transcript_182910.p1 ORF type:5prime_partial len:80 (-),score=13.00,Sigma70_r2|PF04542.10|9.3e-16 S_Transcript_182910:287-526(-)
ATCAAAAGCAACATAAGACTTGTTATATCTATTGCCAAAAATTATCAAGGATATGGAGTTAACCTTCAAGATCTTGTTCAGGAAGGATGCCGAGGCCTGGTCAGGACTGCAGAAAAGTCTGATGCTTCCAAAGGTTATAAGTTCTCAACTTTTGATTACTGGTGGATGAAACAAGCAGTTCGGAAATCTCTTTCTGATCAGTCCATGACTATCCGGTCACCAGTGAGTTTCCATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_182910.p1 GENE.S_Transcript_182910~~S_Transcript_182910.p1 ORF type:5prime_partial len:80 (-),score=13.00,Sigma70_r2|PF04542.10|9.3e-16 S_Transcript_182910:287-526(-)
IKSNIRLVISIAKNYQGYGVNLQDLVQEGCRGLVRTAEKSDASKGYKFSTFDYWWMKQAVRKSLSDQSMTIRSPVSFHW*

Click here to download the sequence:
Link to NCBI Protein BLAST