Transcript Information: S_Transcript_18301.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value5E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4498334934493
Replicate 21.8385657964596
Replicate 32.3907250478742
Condition 2: 8 Hour
Replicate 12.1720304952636
Replicate 22.9000544532979
Replicate 34.3421171047184
Condition 3: 24 Hour
Replicate 12.0226743972772
Replicate 24.8265524653332
Replicate 32.8024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18301.p2 GENE.S_Transcript_18301~~S_Transcript_18301.p2 ORF type:complete len:108 (+),score=21.74,RVT_1|PF00078.23|1.7e-15 S_Transcript_18301:2173-2496(+)
ATGCATGATTTTTTCAAAGGGGAGAAGGGGCTGAGACAAGGAGATCCATTGTCACCTCTGTTATTTGATATTTGCATGGAGTATTTATCTAGGATTCTGGGAGTTGTTGGGAAGAAACAAAGTTTTGTTTATCATCCGATATGTAGTTCTGTGGGTTTGAATCATCTGTGCTTTGCAGATGATCTCTTACTTTTCTGTGCTAGAAATATAACTTCTGTTCACTTGTTAGTTTGGGGATTTGAAGCTTTCTCTAAAGCTTCTGGATTAACAACCAATAAGCAGAAAACTGAGATTTCTTTGGCAATACATTTGGTTTCTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18301.p2 GENE.S_Transcript_18301~~S_Transcript_18301.p2 ORF type:complete len:108 (+),score=21.74,RVT_1|PF00078.23|1.7e-15 S_Transcript_18301:2173-2496(+)
MHDFFKGEKGLRQGDPLSPLLFDICMEYLSRILGVVGKKQSFVYHPICSSVGLNHLCFADDLLLFCARNITSVHLLVWGFEAFSKASGLTTNKQKTEISLAIHLVSG*

Click here to download the sequence:
Link to NCBI Protein BLAST