Transcript Information: S_Transcript_183062.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4553985050489
Replicate 22.4131176078532
Replicate 31.7290065078376
Condition 2: 8 Hour
Replicate 12.9988830133468
Replicate 21.7478006749786
Replicate 31.6653005941392
Condition 3: 24 Hour
Replicate 11.8772946749729
Replicate 22.3017933632228
Replicate 31.3793305534048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183062.p2 GENE.S_Transcript_183062~~S_Transcript_183062.p2 ORF type:complete len:128 (+),score=27.51,RVT_1|PF00078.23|6.5e-06 S_Transcript_183062:347-730(+)
ATGTCCCCGTTCCTTTTTACTCTTGTGGTTAATGCCTTGAGTAGGTTGCTGGAGAGAGCTATGGATAGAGGTGCGGTGTCTGGTTTCACGATGGGGTGGGAGGATGTGAAGGTTTCCCATCTGCCATTTGCTGATGATACCATTCCTTTCTTGGATGCTGACTTTTTGCTATACCAACATGCAGTCTTGCTATTGCAATTTTTTGAGGCTATCTCGGGGATGCATATCAATCTTAGCAAATTTATCTTGGCTGGAGTTAATGTGGATCATGAGGAGCTTGTGGGTTTTGCGGAGGTTGTTGGGTGTCAAATTCAGATTGGGCCTTTGACATATTTGGGGGTTCCACTTGGAGGTAATCATAGGACAGAGTCTTTCTGGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183062.p2 GENE.S_Transcript_183062~~S_Transcript_183062.p2 ORF type:complete len:128 (+),score=27.51,RVT_1|PF00078.23|6.5e-06 S_Transcript_183062:347-730(+)
MSPFLFTLVVNALSRLLERAMDRGAVSGFTMGWEDVKVSHLPFADDTIPFLDADFLLYQHAVLLLQFFEAISGMHINLSKFILAGVNVDHEELVGFAEVVGCQIQIGPLTYLGVPLGGNHRTESFWS*

Click here to download the sequence:
Link to NCBI Protein BLAST