Transcript Information: S_Transcript_183290.p1


Annotated TAIR IDAT1G56580.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)SVB
Annotation TypeHomolog
Chromosome Positionchr1:21198402-21198902 | Reverse length=166
E-Value5E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 175.61223292113
Replicate 260.348218495555
Replicate 341.441912846679
Condition 2: 8 Hour
Replicate 161.090971084963
Replicate 253.429238516053
Replicate 359.182823938537
Condition 3: 24 Hour
Replicate 145.488757386296
Replicate 251.86013354823
Replicate 358.604162000123


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183290.p1 GENE.S_Transcript_183290~~S_Transcript_183290.p1 ORF type:complete len:170 (+),score=42.71,DUF538|PF04398.8|1.1e-32 S_Transcript_183290:1268-1777(+)
ATGTCTTTGATAACAGAAGAAATCAAAGCCAAAGCAACAGAACTCTATCATGGAAATGAAGTGTGCAAGGCCCAATTCCAGAGGCTGCTAAAAGAAGTGGGCCTGCCCAATGGGCTTCTTCCACTAGAAGAAGTGGAAGAGTGTGGGTACATAGAACCCACAGGCTTTGTTTGGATGAAACAAAAGAAAGAAACAAAGCACAAGTTTGAGAAAATAGGCAGGCTAGTTAGCTATGCCAATGAAGTGACTGCTTATGTTGAGCCTTGCAAGATAAAGAAGCTTACTGGAGTGAAGGCTAAGGAGCTCCTCTTATGGCTCACCGTCTCTGAGATAACTGTTGACAGCCCCGAAAGCGAGAAGATTGTCTTCAAGACAACCACTGGCTTGTCTAGAACCTTCCCCACCGACGCCTTCATGGTGCCCGACAAAGGGGCTGTTAAAGATGTAGTCAAGGAGAAGGAGAAAATTGAGGCTGGTGCTATTAAAGGAGTAGTGGTTAAGGAGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183290.p1 GENE.S_Transcript_183290~~S_Transcript_183290.p1 ORF type:complete len:170 (+),score=42.71,DUF538|PF04398.8|1.1e-32 S_Transcript_183290:1268-1777(+)
MSLITEEIKAKATELYHGNEVCKAQFQRLLKEVGLPNGLLPLEEVEECGYIEPTGFVWMKQKKETKHKFEKIGRLVSYANEVTAYVEPCKIKKLTGVKAKELLLWLTVSEITVDSPESEKIVFKTTTGLSRTFPTDAFMVPDKGAVKDVVKEKEKIEAGAIKGVVVKEV*

Click here to download the sequence:
Link to NCBI Protein BLAST