Transcript Information: S_Transcript_18354.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value9E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7897825972271
Replicate 28.0765568915902
Replicate 36.5537580011366
Condition 2: 8 Hour
Replicate 18.3397508561645
Replicate 28.4693426993251
Replicate 310.048899585206
Condition 3: 24 Hour
Replicate 18.3868749115674
Replicate 29.6321199199476
Replicate 38.962833636818


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18354.p1 GENE.S_Transcript_18354~~S_Transcript_18354.p1 ORF type:complete len:560 (+),score=74.19,RVT_3|PF13456.2|4.9e+03,RVT_3|PF13456.2|6.7e+03,RVT_3|PF13456.2|2.4e-21,zf-RVT|PF13966.2|3.3e-15,zf-RVT|PF13966.2|1.6e+04 S_Transcript_18354:441-2120(+)
ATGGAAAAATTCTTGTCATGGTCGGGTAAGGAGGTATTGATAAAGGCGGTGGCTCAAGCCATCCCAACCTATGCAATGGGAGTTTTCAAGCTACCAGGTGATTTTTGCAAGGAGATTGAAGCAATGATCCGAAAATTCTGGTGGGGACACAAGGATGGCAAGCGGAAAATCCATTGGATTAAATGGAGCAACTTATGTAAGTCAAAAGGTGATGGTGGACTTGGGTTTAGAGACTTATGTGCCTTTAATGATGCTATGCTTGCAAAGCAACTCTGGAGACTATTGTGTGAACCACATTCACTTTGTGCTCGAATTTTCCAAGCACGTTACTATCCTGGTACTAGTCCGCTTGAGGCAAATCTTGGAGCGAGACCAAGTTATGTATGGAGAAGCCTATGGGGGGCAAGGGAAGCTCTTAAGTTGGGGCTAAGATGGGGCATAGGGAATGGAGATAAAGTAAGGGTATGGGAGGATCCGTGGCTTCCTAGACCCTATTCTTTCAAGCCTATATCTACTAGAGCCCATGATGCACCAAGCCTCAAAGTTAGTGACCTGATTGACAAAGAGGCGGGCGAGTGGCGATTGGAGGTAATGCAAACTCTTTTTGATCCTGCAAATGTGGAGATAATTAGAAATATTCCCCTGTGCAATAGGTGGCCTGATGACCGGGTTGTATGGAAATATACCCCCACTGGATGCTTTACAGTTCGGTCAGCGTATCACCTGATCATGGAACAACGAGATAGGCACAAAGATGGATCAAGTTCTTCAAGCAAGCATGTGTTATGGAAGCGTTTATGGCAATTGGATATACCTCCGAGGATCAAGAACTTTGGATGGCAGGCTATCTCTCATGCTCTACCAACTGGGGAAGCGGTAGCAAGGCGGGTTGACATGGGAACCTTGGGATGCCAACTTTGCGGGGCAACGGAGGATACGGACTTGCATGCTCTTTTATACTGCCCCTGGGCATGTGGGCAATGGGAAAGGAGTGGTTGGGATGAAAGTTTGTGGTCTAAAATTTACACATGTGTATGGGATTGGTGGGAGGATGTTTGGCGGCCAAATAAAGTTGATGACTTTGGGGCCTTTCTTGCTGCAGTTTGGGGCATTTGGATAGAAAGATGTAAAATACTTTATGATATTGAGCATGAGCAGGATGAACTAGCATGTGCCAATGCACGAAAATTTGTGGCCAGATACCGAGAAGCAAACGCCAAAACTATTGTGTCCTGTGAGAACCTGAATGCAGCTTGGACACCCCCTCCTAGTGGGGTATGGAAACTGAATGTAGATGCTGGAAAGTGTGGCGACTGGGGCTATGGTTGGGGTATGACTGTAAGAGATACTATGGGGGATATTGTGATGGTAGCGGTTCATCAAACACCGGGAAAATTTGTGGCTGAATTAGAAGAGGCAAAAGCGTTGCTTTTTGGGCTTCGATTGGCATGGGAAGCAGGCTACAGATCTTTAATAGCTGAAAGTGACTGCCTTAGTCTTATCTCTAAGCTTAAGCACAAGCAGAAATTACGTTCACCCTTAGGTTATATTATTGATGCAATTTTAGAGATTGCTACCGCTTTTGATTTTATTTCTTGGTCACATGTACGTAGGGAGGGCAATTGTGTAGCCCATAGCATAGCTAGGCTCCAACCTATTGAATTGGAGGATAGAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18354.p1 GENE.S_Transcript_18354~~S_Transcript_18354.p1 ORF type:complete len:560 (+),score=74.19,RVT_3|PF13456.2|4.9e+03,RVT_3|PF13456.2|6.7e+03,RVT_3|PF13456.2|2.4e-21,zf-RVT|PF13966.2|3.3e-15,zf-RVT|PF13966.2|1.6e+04 S_Transcript_18354:441-2120(+)
MEKFLSWSGKEVLIKAVAQAIPTYAMGVFKLPGDFCKEIEAMIRKFWWGHKDGKRKIHWIKWSNLCKSKGDGGLGFRDLCAFNDAMLAKQLWRLLCEPHSLCARIFQARYYPGTSPLEANLGARPSYVWRSLWGAREALKLGLRWGIGNGDKVRVWEDPWLPRPYSFKPISTRAHDAPSLKVSDLIDKEAGEWRLEVMQTLFDPANVEIIRNIPLCNRWPDDRVVWKYTPTGCFTVRSAYHLIMEQRDRHKDGSSSSSKHVLWKRLWQLDIPPRIKNFGWQAISHALPTGEAVARRVDMGTLGCQLCGATEDTDLHALLYCPWACGQWERSGWDESLWSKIYTCVWDWWEDVWRPNKVDDFGAFLAAVWGIWIERCKILYDIEHEQDELACANARKFVARYREANAKTIVSCENLNAAWTPPPSGVWKLNVDAGKCGDWGYGWGMTVRDTMGDIVMVAVHQTPGKFVAELEEAKALLFGLRLAWEAGYRSLIAESDCLSLISKLKHKQKLRSPLGYIIDAILEIATAFDFISWSHVRREGNCVAHSIARLQPIELEDRI*

Click here to download the sequence:
Link to NCBI Protein BLAST