Transcript Information: S_Transcript_18355.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.835293360038
Replicate 29.7706639468994
Replicate 310.14350484598
Condition 2: 8 Hour
Replicate 112.79523419028
Replicate 215.979891885519
Replicate 316.139141758057
Condition 3: 24 Hour
Replicate 116.851767264173
Replicate 212.141327630186
Replicate 311.530077442339


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18355.p2 GENE.S_Transcript_18355~~S_Transcript_18355.p2 ORF type:5prime_partial len:140 (+),score=0.41,RVT_1|PF00078.23|1.3e-14 S_Transcript_18355:2-421(+)
GGGAAACTCTGCCGAAATTTTCCCAGAAATTTCCCAATTTTATTTTATTTATCGGTTTTAAATCGAAATTATATTTATTTTATTTGCCTAAAATCCGGGGTGTTACAAAAGCCAACGAGAGGGCTCCGGCAAGGAGACCCACTCTCGCCGTACCTATTTCTTTTGTGTGCAGAAGGCTTGTCTAACTTGCTTACATGTGCAGCCAATGAAGGGACTTTTCAAGGCCACAAGGTTTGTAATGGTGCACCAACAGTGACTCATTTACTCTTTGCCGACGATACCATTATTTTTGCAAAAGCAAATGAGGATCATGCAATGAAAATTTCAGCACTCTTGAATTTATATGAACAAGCTTCGGGCCAACAAGTCAACAAGGGGAAGACAACGATTTCTTTTAGCAAGGGGTGCCACAAACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18355.p2 GENE.S_Transcript_18355~~S_Transcript_18355.p2 ORF type:5prime_partial len:140 (+),score=0.41,RVT_1|PF00078.23|1.3e-14 S_Transcript_18355:2-421(+)
GKLCRNFPRNFPILFYLSVLNRNYIYFICLKSGVLQKPTRGLRQGDPLSPYLFLLCAEGLSNLLTCAANEGTFQGHKVCNGAPTVTHLLFADDTIIFAKANEDHAMKISALLNLYEQASGQQVNKGKTTISFSKGCHKL*

Click here to download the sequence:
Link to NCBI Protein BLAST