Transcript Information: S_Transcript_183570.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.534612056749
Replicate 213.741966067252
Replicate 316.334994816903
Condition 2: 8 Hour
Replicate 115.354281028336
Replicate 218.15315718195
Replicate 313.276727936817
Condition 3: 24 Hour
Replicate 112.357962660393
Replicate 29.065524630539
Replicate 39.0799359858418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183570.p1 GENE.S_Transcript_183570~~S_Transcript_183570.p1 ORF type:complete len:175 (+),score=41.76 S_Transcript_183570:176-700(+)
ATGTTGCCAAAGAAGAATCACCATAATAAAGCTTCTTTGGATCACAAATACAACCAACTTCGTTCCGCAACCAGTTCTAATGCTGTTAACAAGGCGTCGATATTGGTAGACGCTTCGAAATACATACAAGAGCTCAAGGGAAAAGTTGAAAGGCTCAATCAAGAAATGAGCACTAGTAGTAGTAGTAGTTCTAGTACTAATATTGACGCTTGTTGTGCTTCAACTACAAGTACCACTAACGATGATGAGGATGATCAAACACCTACACCCAAGGTGAATGTGGAAACTCGAGAGAAAGGGTTCTTAATAAACGTTTATTCAGAGAGAAATTGCCCTGGCTTGTTGGTGTCAATTCTCGAAGCATTTGAAGAGCTGGGACTTGAAGTGCTTGATGCTAGGGTTTCCTGTGCTGATTGCTTTCAGCTTGAAGCTGTTGGTGAAGAGAATGGAGCAGATAGTTTGGATGCTCAAGTAGTGAGGCAAGCTGTGTTGCAAGCTATCAAGAATTGGAGTGGGAGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183570.p1 GENE.S_Transcript_183570~~S_Transcript_183570.p1 ORF type:complete len:175 (+),score=41.76 S_Transcript_183570:176-700(+)
MLPKKNHHNKASLDHKYNQLRSATSSNAVNKASILVDASKYIQELKGKVERLNQEMSTSSSSSSSTNIDACCASTTSTTNDDEDDQTPTPKVNVETREKGFLINVYSERNCPGLLVSILEAFEELGLEVLDARVSCADCFQLEAVGEENGADSLDAQVVRQAVLQAIKNWSGSS*

Click here to download the sequence:
Link to NCBI Protein BLAST