Transcript Information: S_Transcript_183572.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.488111812378
Replicate 23.1059266852812
Replicate 33.1334745773108
Condition 2: 8 Hour
Replicate 14.3478951132019
Replicate 23.2580362096689
Replicate 32.1729747558476
Condition 3: 24 Hour
Replicate 13.2873368359632
Replicate 22.8604810727429
Replicate 32.448742175254


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183572.p1 GENE.S_Transcript_183572~~S_Transcript_183572.p1 ORF type:internal len:206 (+),score=42.01 S_Transcript_183572:1-615(+)
AAACCAAACTCACAGAAATCCAAATATTCAAAGACATTTATCCTTCCTTCAATGTTGCCAAAGAAGAATCACCATAATAAAGCTTCTTTGGATCACAAGTACCACCAACTTCGTTCTGCCACCAATTCTAATGCCGTTAACAAGGCGTCGATATTGGTAGACGCTTCGAAATACATACAAGAGCTCAAGGAAAAAGTTGAAAGGCTTAATCAAGAAATGAGCACTAGTAGTAGTAGTAGTTCTAGTACTAATATTGACGCTTGTTGTGCTTCAACTACAAGTACCACTAACGATGATGAGGATGATCAAACACCTACACCCAAGGTGAATGTGGAAACTCGAGAGAAAGGGTTCTTAATAAACGTTTATTCAGAGAGAAATTGCCCTGGCTTGTTGGTGTCAATTCTCGAAGCATTTGAAGAGCTGGGACTTGAAGTGCTTGATGCTAGGGTTTCCTGTGCTGATTGCTTTCAGCTTGAAGCTGTTGGTGAAGAGGCCAATAATCAACATGTGAAGATGAAGGAATTAACTTTGACCCCATTCTCATGGACATATATGATAAAAAGGATGAGAGAGAGACAAAGAGCTGAAAAACAAGAAAATATAAACTCCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183572.p1 GENE.S_Transcript_183572~~S_Transcript_183572.p1 ORF type:internal len:206 (+),score=42.01 S_Transcript_183572:1-615(+)
KPNSQKSKYSKTFILPSMLPKKNHHNKASLDHKYHQLRSATNSNAVNKASILVDASKYIQELKEKVERLNQEMSTSSSSSSSTNIDACCASTTSTTNDDEDDQTPTPKVNVETREKGFLINVYSERNCPGLLVSILEAFEELGLEVLDARVSCADCFQLEAVGEEANNQHVKMKELTLTPFSWTYMIKRMRERQRAEKQENINST

Click here to download the sequence:
Link to NCBI Protein BLAST