Transcript Information: S_Transcript_183576.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value9E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32454879555098
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.26006573557479
Replicate 20.27282742243569
Replicate 30.25994936103636
Condition 3: 24 Hour
Replicate 10.26640101817798
Replicate 20.41458191907953
Replicate 30.30758590737947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183576.p1 GENE.S_Transcript_183576~~S_Transcript_183576.p1 ORF type:complete len:164 (+),score=34.97 S_Transcript_183576:176-667(+)
ATGTTGCCAAAGAAGAATCACCATAATAAAGCTTCTTTGGATCACAAATACAACCAACTTCGTTCCGCAACCAGTTCTAATGCTGTTAACAAGGCGTCGATATTGGTAGACGCTTCGAAATACATACAAGAGCTCAAGGGAAAAGTTGAAAGGCTCAATCAAGAAATGAGCACTAGTAGTAGTAGTAGTTCTAGTACTAATATTGACGCTTGTTGTGCTTCAACTACAAGTACCACTAACGATGATGAGGATGATCAAACACCTACACCCAAGGTGAATGTGGAAACTCGAGAGAAAGGGTTCTTAATAAACGTTTATTCAGAGAGAAATTGCCCTGGCTTGTTGGTGTCAATTCTCGAAGCATTTGAAGAGCTGGGACTTGAAGTGCTTGATGCTAGGGTTTCCTGTGCTGATTGCTTTCAGCTTGAAGCTGTTGGTGAAGAGGAATTAACTCCAAAAGCCTCACCAGTTGAGCTAACCCCGCAAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183576.p1 GENE.S_Transcript_183576~~S_Transcript_183576.p1 ORF type:complete len:164 (+),score=34.97 S_Transcript_183576:176-667(+)
MLPKKNHHNKASLDHKYNQLRSATSSNAVNKASILVDASKYIQELKGKVERLNQEMSTSSSSSSSTNIDACCASTTSTTNDDEDDQTPTPKVNVETREKGFLINVYSERNCPGLLVSILEAFEELGLEVLDARVSCADCFQLEAVGEEELTPKASPVELTPQG*

Click here to download the sequence:
Link to NCBI Protein BLAST