Transcript Information: S_Transcript_183577.p1


Annotated TAIR IDAT2G40435.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16887048-16888407 | Forward length=158
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6746734909729
Replicate 24.323863280116
Replicate 34.0777908928564
Condition 2: 8 Hour
Replicate 13.4292084932073
Replicate 23.597483198348
Replicate 33.1063295504747
Condition 3: 24 Hour
Replicate 14.281158071021
Replicate 23.302766511126
Replicate 34.0558061354961


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183577.p1 GENE.S_Transcript_183577~~S_Transcript_183577.p1 ORF type:complete len:199 (+),score=41.16 S_Transcript_183577:159-755(+)
ATGTTGCCAAAGAAGAATCACCATAATAAAGCTTCTTTGGATCACAAGTACCACCAACTTCGTTCTGCCACCAATTCTAATGCCGTTAACAAGGCGTCGATATTGGTAGACGCTTCGAAATACATACAAGAGCTCAAGGAAAAAATTGAAAGGCTCAATCAAGAAATGAGCACTAGTAGTAGTAGTAGTTCTAGTACTAATATTGAGGCTTGTTGTGCTTCAACTACTAGTACAACTAACGATGATGGGGATGATCAAACACCTATACCTAAGGTGAATGTGGAAACTCGAGAGAAAGGGTTCTTAATAAACGTTTATTCAGAGAGAAATTGCCCTGGCTTGTTGGTGTCAATTCTCGAAGCATTTGAAGAGCTGGGACTTGAAGTGCTTGATGCTAGGGTTTCCTGTGCTGATTGCTTTCAGCTTGAAGCTGTTGGTGAAGAGGCCAATAATCAACATGTGAAGATGAAGGAATTAACTTTGACCCCATTCTCATGGACATATATGATAAAAAGGATGAGAGAGAGACAAAGAGCTGAAAAACAAGAAAATATAAACTCCACAGGAATGGAGCAGATAGTTTGGATGCTCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183577.p1 GENE.S_Transcript_183577~~S_Transcript_183577.p1 ORF type:complete len:199 (+),score=41.16 S_Transcript_183577:159-755(+)
MLPKKNHHNKASLDHKYHQLRSATNSNAVNKASILVDASKYIQELKEKIERLNQEMSTSSSSSSSTNIEACCASTTSTTNDDGDDQTPIPKVNVETREKGFLINVYSERNCPGLLVSILEAFEELGLEVLDARVSCADCFQLEAVGEEANNQHVKMKELTLTPFSWTYMIKRMRERQRAEKQENINSTGMEQIVWMLK*

Click here to download the sequence:
Link to NCBI Protein BLAST