Transcript Information: S_Transcript_183643.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.80341135804318
Replicate 20.99906971581199
Replicate 30.55676184403323
Condition 2: 8 Hour
Replicate 10.88520488108854
Replicate 20.84422070338591
Replicate 30.72393444696163
Condition 3: 24 Hour
Replicate 11.2365028390902
Replicate 20.94076198996159
Replicate 31.0469527866275


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183643.p1 GENE.S_Transcript_183643~~S_Transcript_183643.p1 ORF type:complete len:265 (+),score=16.36,RVT_1|PF00078.23|6.4e-20 S_Transcript_183643:3281-4075(+)
ATGGTTTGTGTGAGCACAGTGCAGTATGTAATCAATATTAATGGTGAGCTAACATACCCCTTTGAGGCTAAACGAGGTTTGAGGCAAGGTGATCCTCTTTCTCCTTATCTGTTTGTACTTTGTATGGAGTATTTAAATAGATGTTTAAAGGAGTTGGAACTTAATCCAGATTTCAATTATCATCCCCGTTGTGCAAAACTCAAGATCACACACTTATGTTTTGCTGACGATCTTATGATGTTTACTCGAGGTGATCTCACCTCTGTTAGCCTCATGCAACAAGCATTTCAGAAATTTTGCAGTGCATCCGGGCTTCAAGCTAATTTGGCTAAAAGCCCTATTTTCTTTGGAGGCGTTGGCATATTTGAGAAAGAGATGATTTTGGAGATTTTGGGTTATAGAGTTGGGGTCTTACTAGTGAAATATCTTGGGGTACCCCTTTCCTCTAAACGGCTGTCAGTCAGCCAATGTGCTCCTCTTATAGAGAAAATCCTGGCTCGAATTACTTCTTGGACCTCAAGGTATTTATCTTATGCTGGGTGGAAACAACTAATCCAATCAGTTTTATTTGGCATCCAATCTTATTGGTCTCAACTGTTTATGCTCCCCAAGAAAGTCCTAAAAATAGTAGAAGGCATTTGCCGCTCTTTCTTCTGGTCAGGAGGGGTGACTATTACAAAGAAAACTTTAATTGCTTGGGATACAGTGTGTCCGCCTAAGGTTGTAGGGGGCTTAATCTCACCCAATTATGTACTTCGAATAAGGCTGCAATTTTCCGTCTATTCTGGGATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183643.p1 GENE.S_Transcript_183643~~S_Transcript_183643.p1 ORF type:complete len:265 (+),score=16.36,RVT_1|PF00078.23|6.4e-20 S_Transcript_183643:3281-4075(+)
MVCVSTVQYVININGELTYPFEAKRGLRQGDPLSPYLFVLCMEYLNRCLKELELNPDFNYHPRCAKLKITHLCFADDLMMFTRGDLTSVSLMQQAFQKFCSASGLQANLAKSPIFFGGVGIFEKEMILEILGYRVGVLLVKYLGVPLSSKRLSVSQCAPLIEKILARITSWTSRYLSYAGWKQLIQSVLFGIQSYWSQLFMLPKKVLKIVEGICRSFFWSGGVTITKKTLIAWDTVCPPKVVGGLISPNYVLRIRLQFSVYSGI*

Click here to download the sequence:
Link to NCBI Protein BLAST