Transcript Information: S_Transcript_183643.p3


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8709819978444
Replicate 21.3371387610615
Replicate 31.1177415808243
Condition 2: 8 Hour
Replicate 10.90471352860564
Replicate 21.4914565759818
Replicate 31.9378043277256
Condition 3: 24 Hour
Replicate 11.3239323327633
Replicate 21.2362079041644
Replicate 30.91716525109513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183643.p3 GENE.S_Transcript_183643~~S_Transcript_183643.p3 ORF type:complete len:165 (+),score=19.81,zf-RVT|PF13966.2|6.2e-16,zf-RVT|PF13966.2|1.1e+04 S_Transcript_183643:4174-4668(+)
ATGATCAGGAAAGTTATTCAGGCCAGAGAAATTAAGGATTATCTTAGTGACTGGAATGTTGTTGTTACCCATGGCAAACTCTCCATTCGCAATGTTTACCTGAACATGCTGGGCCAATTCCCTAAGGTACCATGGCGTAAGTTAATTCTTTCTAACAGAGCGCGGCCTAGGGCCGTGATGACACTGTGGTTGGCTATGTGGAAGCGGCTTCAAACAGCAGACCATTTAAGAGCATGGGGTATGGGAATTGATGATAAATGTGCTTTCTGTAAAACCAACGCTGAACATTCAGATCATATCTTCTTCTACTGTGATTTTGCCCAGCAACTATGGAAACTCATTTTTAGCTGGTATCAAATGCCTTTACCCAGTGACATACAGCAAGCTGTATTACAGGTGGCTAAGAAGAATTCTTCTAAAGCTCGTTTTTTCAGCATGGGTGTTGCAGAGACCATTCACTCCCTTTGGCTGGGAAAGAAATCGAAGAGTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183643.p3 GENE.S_Transcript_183643~~S_Transcript_183643.p3 ORF type:complete len:165 (+),score=19.81,zf-RVT|PF13966.2|6.2e-16,zf-RVT|PF13966.2|1.1e+04 S_Transcript_183643:4174-4668(+)
MIRKVIQAREIKDYLSDWNVVVTHGKLSIRNVYLNMLGQFPKVPWRKLILSNRARPRAVMTLWLAMWKRLQTADHLRAWGMGIDDKCAFCKTNAEHSDHIFFYCDFAQQLWKLIFSWYQMPLPSDIQQAVLQVAKKNSSKARFFSMGVAETIHSLWLGKKSKSI*

Click here to download the sequence:
Link to NCBI Protein BLAST