Transcript Information: S_Transcript_183952.p1


Annotated TAIR IDAT4G02750.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:1221116-1223461 | Reverse length=781
E-Value1E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1814182791318
Replicate 20.61858288479014
Replicate 30.43090504868226
Condition 2: 8 Hour
Replicate 11.743898740887
Replicate 21.829473603716
Replicate 31.743118378912
Condition 3: 24 Hour
Replicate 10.5103944740793
Replicate 20.84724529257373
Replicate 31.1196701955542


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_183952.p1 GENE.S_Transcript_183952~~S_Transcript_183952.p1 ORF type:5prime_partial len:428 (+),score=79.51,PPR|PF01535.16|3e-08,PPR|PF01535.16|3.1e-05,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|0.001,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|0.43,PPR|PF01535.16|0.086,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.15,PPR_2|PF13041.2|6.6e-07,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|7.1e-06,PPR_2|PF13041.2|1e-07,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|1e-09,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|49,PPR_2|PF13041.2|21,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.00057,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|23,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|0.0067,PPR_1|PF12854.3|0.0072,PPR_1|PF12854.3|97,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.034 S_Transcript_183952:3-1286(+)
AAGGTGTTTGATGAAAGTTTTGAATCAGATTTGGTGACTTGGAATACTATGATTTATGGGTATGTCAAGAATGGGCGAGTGGGTCTCGCAAGTAACATGTTCAATGAAATGCCTGAGAGAGATTCATTCACTTGGAATTCTATGCTTGCAGGCTATGTCGGGGTTGGATATATAGATGCAGCCCTGGAATTGTTTGGGTCAATGCCTCATAGGGATGTTGTTTCTTGGAATTGTTTGCTTGAAGGGTGTGCTAGTATAGGGGATATCTCGGCTGCTCATGAGTGTTTTGATCGCATGCCTGAGCGTAATGTGTTGTGCTGGAATACTATGTTGGCCCTTTATGTTCGATGTAAGAAGTATCACGAGTGTTTGGGATTGTTTGATAGGATGATTCAAGAAGGTGAGACTCAGCCCAATGAGGCTACTCTTGTGAGTGTCCTAACAGCATGTGGTTATTTGGGTAGTTTAGATCGGGGTAAGTGGATCCATCAATATATAGAAATCAATAGGAAGATTAAACCTGATGTGTTGCTTTCTACGGCTTTGTTAACTATGTATACAAAGTGTGGAGATATGGATTTGGCTAAAAAGGTCTTCAATAGTATGCCTGAGAAAAGTGTTGTGTCGTGGAATTCTATGATTATGGCCTATGGAACACATGGTCTCGGAGAAAAATCTCTTGAGATATTTCTCGAGATGGAGAGAAGTGGACAAAAACCAAATGATGCCACCTTTGTGTGTGTCTTAGCTGCGTGTGCTCATTCAGGAATGGTTTTGGAGGGTTGGTGGTATTTTGATGTCATGCGTAGAGTTTACAAGATTGAACCAAAGGTTGAGCACTATGGCTGCATGGTGGACCTCCTTGCCAGGGCTGGGTTGCTGAAAGACACTGAAGAGCTTGTAAAGAAGATGCCTCTGGAGGGAGGATCTCGTTTATGGGGAGCCTTGCTTTCTGCTTGCCGTACCCATTCAAATTCACAGCTTGGGGAGTTTGTTGGAAACTGGTTGATTGAGCAAGAACCTGATGATATTGGGGCTTATTTGTTATTATCAAACATATATGCTGCTGAAGGGAAATGGGAAGACGTAGACAAAGTCAGGAGACTAATGAAAGAGAAGGGTTTGCACAAAGTAGCCGGGGCCAGTGTGGCCTCCTACGGGAACAGTGAACCAGAATGCTCTCTGATCAGTGGTTCCTTCCATAAAAGAAACATCATTTGTTCCATGTTGAGACAGATGGGTACTCAGGTGAAGTTGTCGATGAATAAAACAGAAAGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_183952.p1 GENE.S_Transcript_183952~~S_Transcript_183952.p1 ORF type:5prime_partial len:428 (+),score=79.51,PPR|PF01535.16|3e-08,PPR|PF01535.16|3.1e-05,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|3.3e-06,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|0.001,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|0.43,PPR|PF01535.16|0.086,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.15,PPR_2|PF13041.2|6.6e-07,PPR_2|PF13041.2|3.1e-05,PPR_2|PF13041.2|7.1e-06,PPR_2|PF13041.2|1e-07,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|1e-09,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|49,PPR_2|PF13041.2|21,PPR_3|PF13812.2|0.0051,PPR_3|PF13812.2|0.87,PPR_3|PF13812.2|0.00057,PPR_3|PF13812.2|0.023,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.9,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|1.6,PPR_3|PF13812.2|23,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|0.0067,PPR_1|PF12854.3|0.0072,PPR_1|PF12854.3|97,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|5.8e+02,PPR_1|PF12854.3|0.034 S_Transcript_183952:3-1286(+)
KVFDESFESDLVTWNTMIYGYVKNGRVGLASNMFNEMPERDSFTWNSMLAGYVGVGYIDAALELFGSMPHRDVVSWNCLLEGCASIGDISAAHECFDRMPERNVLCWNTMLALYVRCKKYHECLGLFDRMIQEGETQPNEATLVSVLTACGYLGSLDRGKWIHQYIEINRKIKPDVLLSTALLTMYTKCGDMDLAKKVFNSMPEKSVVSWNSMIMAYGTHGLGEKSLEIFLEMERSGQKPNDATFVCVLAACAHSGMVLEGWWYFDVMRRVYKIEPKVEHYGCMVDLLARAGLLKDTEELVKKMPLEGGSRLWGALLSACRTHSNSQLGEFVGNWLIEQEPDDIGAYLLLSNIYAAEGKWEDVDKVRRLMKEKGLHKVAGASVASYGNSEPECSLISGSFHKRNIICSMLRQMGTQVKLSMNKTESS*

Click here to download the sequence:
Link to NCBI Protein BLAST