Transcript Information: S_Transcript_18408.p1


Annotated TAIR IDAT1G32640.1
Annotated Gene NameBasic helix-loop-helix (bHLH) DNA-binding family protein
Annotated Gene Symbol(s)ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1
Annotation TypeOrtholog
Chromosome Positionchr1:11799042-11800913 | Reverse length=623
E-Value7.4E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.483625013787
Replicate 225.124292784199
Replicate 310.153240830338
Condition 2: 8 Hour
Replicate 119.041675818617
Replicate 216.230556856272
Replicate 318.197239433513
Condition 3: 24 Hour
Replicate 116.606065277918
Replicate 214.596451799548
Replicate 312.36374725741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18408.p1 GENE.S_Transcript_18408~~S_Transcript_18408.p1 ORF type:complete len:663 (+),score=94.17,bHLH-MYC_N|PF14215.2|4.2e-53,HLH|PF00010.22|4.1e-10 S_Transcript_18408:296-2284(+)
ATGATGAATTTGTGGGCTGAAGATCATGGATCCTTGATGATGGACGCTTTCATGTCCTCCACATCTTCCGATTTCACCACCTTCGCTGGTGGCAGCACCACTACCACTACTACCACCGCCGCCGCCGCCAACGCCTTTTCGGATGCCCCGCCACCACAAGCGGCGTATTTCAGTCAAGACACGCTTCAACACCGCCTTCAGGCGCTAATCGATGGGCCCCCGGCGGTGGGGACACGGGAGTATTGGACCTACGTGATATTCTGGCAGTTCAGCATGGATTACGCCGGTCAAGCTCTTTTAGCCTGGGGAGATGGCTACTACAAAGGCGAGGAGAACAAAGGCAGAAATAGTAATAATACTACTACTCGTCCCCCACTCAAGCCCGAAGAACAGGAGCATCGTAAGCGTGTTCTTCGTGAGCTCAACTCCCTCATCTCTGGCAACCCTGCCTCCGCCACTGATGATGCCGTCGACGAGGAGGTCACCGACACCGAGTGGTTTTTTCTTATCTCTATGACTCACTCTTTCGCTAGCGGGGAGGACTTGCCGGGCCAGGCCCATATCAGCGCTAACCCTATATGGGCCGCTGGCCCTGACCGGTTGTCGTCCTCGCCGTGTAATCGGGCCAAGCAGGGCTCCTGCTTTGGGCTCCAGACTATGGTTTGTATTCCTGTGCCAAACGGCGTCGTTGAGCTCGGCTCTACCGAGTTGATTTTTCAGAGCCCTAGTTTGATGAACAAAGTTAGGGTTCTGTTTTGTTCTGGTCCTGCTGCTGCTGGTGGGGATAATGGTAGTGCCGGCTTTTTGGGGGTTCAGCCTGACCCGGAAGGCGAGACTGACCCGGCTGCCATTTGGATTAATGAACCCACTCCGGAGGTGAAAGAACAAACACCAACCCCATCCAATAGCAAAACTCCACCCCCACAACCACAACAACCCACCACCACCACCACCACTACTAGCCCCCCTCAAATTGTTCAATCTCAGCCCCCAAATCAAAATCCAATTCCAAATCAGGGTTTCTTTACCAAGGAATTGAATTTCTCGGAGTACGCTATTGACGGGTCGGGTCCGAAGGGTTTGAGCCAGTTAAAGCCGGAATCAGGGGAGATATTGAGCTTTGGTGGCGATACGAAAAGGAATATAACTGGAAATGGGATTTTTGGATCGAATCCGCAGTTCTTGATGGAGGAGAATAATAGTAACAAGAAGAAGAGGTCGCCAACCTCGCGGGGAAGCACTGAAGAAGGCATGTTATCTTTCACTTCGGGTGTGATTCTTCCTTCGACGGGGATCGGAAAATCGAGTACGGCTGGTGGTGATTCGGATCATTCGGATTTGGAGGCATCGGTCCGGGAGGTTGATAGTAGTAGGGTAGTTGTACCGGAGCCGGAGAAACGGCCTAGAAAGAGAGGTAGAAAGCCGGCTAATGGGAGAGAGGAGCCGCTAAATCATGTGGAAGCCGAGAGACAACGTAGAGAGAAGCTCAACCAAAGGTTCTACGCTCTAAGAGCGGTTGTCCCTAATGTTTCGAAGATGGATAAGGCGTCCCTGCTTGGGGACGCCATATCCTACATTAATGAGCTCAAATCGAAGCTCCAAAACTTTGAGACCGAGAAAGATGAGTTGGTTAGTCAAGTAGACGCCCTCAAGAAGGAATTGATGGCCTCTAAATCGAGTGGTGGAGCAGCAGCACAACCGCCACCTCAACAAGACGTTAAGGTGGTGAAACAACAAATGGACTTGGAAATCGATGTCAAGATCATCGGTTGGGATGCCATGATCCGGGTTAATTCCAACAAGAAGAACCACCCGGCTGCTCGCCTCATGATGGCCTTAAAGGATTTGGATTTGGACATCACTCATGCCAGTGTTTCAGTCGTAAACGAGTTGATGATCCAACAAGCTACGGTCAAGATGGGCAGCCGGTATTACAGCCAGGACCAACTTCGGATGGTTCTGGCTACTAAGATTACAGAAACAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18408.p1 GENE.S_Transcript_18408~~S_Transcript_18408.p1 ORF type:complete len:663 (+),score=94.17,bHLH-MYC_N|PF14215.2|4.2e-53,HLH|PF00010.22|4.1e-10 S_Transcript_18408:296-2284(+)
MMNLWAEDHGSLMMDAFMSSTSSDFTTFAGGSTTTTTTTAAAANAFSDAPPPQAAYFSQDTLQHRLQALIDGPPAVGTREYWTYVIFWQFSMDYAGQALLAWGDGYYKGEENKGRNSNNTTTRPPLKPEEQEHRKRVLRELNSLISGNPASATDDAVDEEVTDTEWFFLISMTHSFASGEDLPGQAHISANPIWAAGPDRLSSSPCNRAKQGSCFGLQTMVCIPVPNGVVELGSTELIFQSPSLMNKVRVLFCSGPAAAGGDNGSAGFLGVQPDPEGETDPAAIWINEPTPEVKEQTPTPSNSKTPPPQPQQPTTTTTTTSPPQIVQSQPPNQNPIPNQGFFTKELNFSEYAIDGSGPKGLSQLKPESGEILSFGGDTKRNITGNGIFGSNPQFLMEENNSNKKKRSPTSRGSTEEGMLSFTSGVILPSTGIGKSSTAGGDSDHSDLEASVREVDSSRVVVPEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQNFETEKDELVSQVDALKKELMASKSSGGAAAQPPPQQDVKVVKQQMDLEIDVKIIGWDAMIRVNSNKKNHPAARLMMALKDLDLDITHASVSVVNELMIQQATVKMGSRYYSQDQLRMVLATKITETR*

Click here to download the sequence:
Link to NCBI Protein BLAST