Transcript Information: S_Transcript_184099.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeHomolog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.32685614159281
Replicate 30.068306429939261
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.50364025725216
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184099.p1 GENE.S_Transcript_184099~~S_Transcript_184099.p1 ORF type:5prime_partial len:270 (+),score=-37.90,Chloroa_b-bind|PF00504.17|6.3e-35 S_Transcript_184099:3-812(+)
TCGATACCCCGTTCGTTCGGTAGCTTGTGTGTTTCAGGCGTCCTCGCTTGCGAATCCGATCCAGCAACCATGATGAACGCGCGATGCACCAACGCCGCCCGCATGGGCGCCTTCCTGCGGCCAGCGCAGCAACGCGGCGGCAGTGTTGTGACCCAAGCCAACCGTGAGACTTGGTACCCTGGCGCGGAGCCGCCAGCCTATCTCGATGGTTCCATGGCCGGCGACCGCGGCTTCGACCCGCTGCGCCTCGGGAGCAACACGGACGTGCTGCCGTGGTACTTCGAGGCGGAGCGCTACAACGGCCGCATGGCGATGCTCGGCGTCGCGGGCATCCTTTTCACCGACGCCGTCGGCCTGCCAAAGTGGTACAACGCCGGCGCCGAGAAGTACGCGCTCGACACGACGACGCTGCTCGTGATCGAGCTCGCGGTGTGGGCCGTCTTTGAGTACAAGCGCTACGGCAACATCAAGAAGTACGGCCAGGGCGGCGTGCTTGGCATGGTGCCGTTCGACCCCGCGGGCCTCAACAGCGACAAGATGCAGGAGCGGGAGGTCAAGAACGGGCGCCTCGCGATGATCGCGTTCCTGGGCTTTGCGAGCCAGGCCGCGGTGCGCGGCAAGGGCCCCGTTGACTGCCTCAAGGACCACATGGCGGACCCGGGCCACGTCAACATCTGCACCAGCAGCGTCGGCGTCGAGGCGACCGTCGCCGCGTGCGTGCTCGCGTTCTCGCCGATCATCATCGAGGCGCGCAAGAGCGTCGGCGCGCAGGACGAGAACGACGAGGACCTCAAGCCCATCCCGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184099.p1 GENE.S_Transcript_184099~~S_Transcript_184099.p1 ORF type:5prime_partial len:270 (+),score=-37.90,Chloroa_b-bind|PF00504.17|6.3e-35 S_Transcript_184099:3-812(+)
SIPRSFGSLCVSGVLACESDPATMMNARCTNAARMGAFLRPAQQRGGSVVTQANRETWYPGAEPPAYLDGSMAGDRGFDPLRLGSNTDVLPWYFEAERYNGRMAMLGVAGILFTDAVGLPKWYNAGAEKYALDTTTLLVIELAVWAVFEYKRYGNIKKYGQGGVLGMVPFDPAGLNSDKMQEREVKNGRLAMIAFLGFASQAAVRGKGPVDCLKDHMADPGHVNICTSSVGVEATVAACVLAFSPIIIEARKSVGAQDENDEDLKPIPW*

Click here to download the sequence:
Link to NCBI Protein BLAST