Transcript Information: S_Transcript_184103.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeHomolog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value4E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74815666122997
Replicate 21.9493227721499
Replicate 30.1481344263743
Condition 2: 8 Hour
Replicate 10.51386482691887
Replicate 20.26954034505695
Replicate 30.51363488204774
Condition 3: 24 Hour
Replicate 10.087730455785519
Replicate 21.4563091775966
Replicate 31.2155202122947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184103.p1 GENE.S_Transcript_184103~~S_Transcript_184103.p1 ORF type:complete len:249 (+),score=-44.12,Chloroa_b-bind|PF00504.17|1.6e-37 S_Transcript_184103:69-815(+)
ATGATGATGAACGCTCGATGCACCGCCAGCGCAGCCCGCGTCGGCGCCCTCGTGCGGCCCGCGCAACAACGCGGCGCCAGCGCAGCGTGCCGCGCCAGCCGTGAGACCTGGTACCCTGGCGCAGAGCCGCCAGCCTACCTTGATGGCTCGATGGCGGGCGACCGCGGCTTTGACCCGCTCCGCTTCGGCGCGAACAAGGAGGCGCTCGCGTGGTACCGCGAGGCGGAGCTCTACAACGGCCGCGTCGCGATGATGGCCGTCGTGGGCATCCTCTTCACCGACGCCGTGGGCCTGCCCAAGTGGTGGCTCGCGGGCGCCGAGAAGTACGCGCTGGACAACAAGACGCTGATCATCATCGAGGCCGCGACGTTCGCGGTGCTCGAGTACAAGCGCTACGACAACTTCAAGAAGAAGGGCCAGACCGGCTTCCTCGGCATGGCACCGTTTGACCCCGCGGGCCTCAACAGCGACAAGATGCAGGAGCGGGAGGTCAAGAACGGGCGCCTCGCGATGATCGCGTTCCTGGGCTTTGCGAGCCAGGCCGCGGTGCGCGGCAAGGGCCCCGTTGACTGCCTCAAGGACCACATGGCGGACCCGGGCCACGTCAACATCTGCACCAGCAGCGTCGGCGTCGAGGCGACCGTCGCCGCGTGCGTGCTCGCGTTCTCGCCGATCATCATCGAGGCGCGCAAGAGCGTCGGCGCGCAGGACGAGAACGACGAGGACCTCAAGCCCATCCCGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184103.p1 GENE.S_Transcript_184103~~S_Transcript_184103.p1 ORF type:complete len:249 (+),score=-44.12,Chloroa_b-bind|PF00504.17|1.6e-37 S_Transcript_184103:69-815(+)
MMMNARCTASAARVGALVRPAQQRGASAACRASRETWYPGAEPPAYLDGSMAGDRGFDPLRFGANKEALAWYREAELYNGRVAMMAVVGILFTDAVGLPKWWLAGAEKYALDNKTLIIIEAATFAVLEYKRYDNFKKKGQTGFLGMAPFDPAGLNSDKMQEREVKNGRLAMIAFLGFASQAAVRGKGPVDCLKDHMADPGHVNICTSSVGVEATVAACVLAFSPIIIEARKSVGAQDENDEDLKPIPW*

Click here to download the sequence:
Link to NCBI Protein BLAST