Transcript Information: S_Transcript_184105.p1


Annotated TAIR IDAT1G45474.1
Annotated Gene Namephotosystem I light harvesting complex gene 5
Annotated Gene Symbol(s)LHCA5
Annotation TypeHomolog
Chromosome Positionchr1:17179353-17180439 | Forward length=256
E-Value1E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40943078823355
Replicate 21.0182825949622
Replicate 30
Condition 2: 8 Hour
Replicate 10.16404146397795
Replicate 20
Replicate 30.24595208774978
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.3880314523864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184105.p1 GENE.S_Transcript_184105~~S_Transcript_184105.p1 ORF type:5prime_partial len:260 (+),score=-44.72,Chloroa_b-bind|PF00504.17|2.5e-35 S_Transcript_184105:2-781(+)
CGTTTCCGGTGCAACAGTGTGTCAGCCTCCCGACGCTCGCAAACCACCATGACGTCCGCAGTCCGTATGTTCGCTTCAGCGCCCGTGGCGCGCTGCACAGCTGCGCCACGCGCGCCCGTGTGCCGTGCTGCACGCGAGACATGGTACCCTGGCGCGGAGCCACCAGCGTACCTTGATGGATCGCTACCCGGCGACCGCGGCTTCGACCCGCTGCGCCTCGGGAGCAACACGGACGTGCTGCCGTGGTACTTCGAGGCGGAGCGCTACAACGGCCGCATGGCGATGCTCGGCGTCGCGGGCATCCTTTTCACCGACGCCGTCGGCCTGCCAAAGTGGTACAACGCCGGCGCCGAGAAGTACGCGCTCGACACGACGACGCTGCTCGTGATCGAGCTCGCGGTGTGGGCCGTCTTTGAGTACAAGCGCTACGGCAACATCAAGAAGTACGGCCAGGGCGGCGTGCTTGGCATGGTGCCGTTCGACCCCGCGGGCCTCAACAGCGACAAGATGCAGGAGCGGGAGGTCAAGAACGGGCGCCTCGCGATGATCGCGTTCCTGGGCTTTGCGAGCCAGGCCGCGGTGCGCGGCAAGGGCCCCGTTGACTGCCTCAAGGACCACATGGCGGACCCGGGCCACGTCAACATCTGCACCAGCAGCGTCGGCGTCGAGGCGACCGTCGCCGCGTGCGTGCTCGCGTTCTCGCCGATCATCATCGAGGCGCGCAAGAGCGTCGGCGCGCAGGACGAGAACGACGAGGACCTCAAGCCCATCCCGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184105.p1 GENE.S_Transcript_184105~~S_Transcript_184105.p1 ORF type:5prime_partial len:260 (+),score=-44.72,Chloroa_b-bind|PF00504.17|2.5e-35 S_Transcript_184105:2-781(+)
RFRCNSVSASRRSQTTMTSAVRMFASAPVARCTAAPRAPVCRAARETWYPGAEPPAYLDGSLPGDRGFDPLRLGSNTDVLPWYFEAERYNGRMAMLGVAGILFTDAVGLPKWYNAGAEKYALDTTTLLVIELAVWAVFEYKRYGNIKKYGQGGVLGMVPFDPAGLNSDKMQEREVKNGRLAMIAFLGFASQAAVRGKGPVDCLKDHMADPGHVNICTSSVGVEATVAACVLAFSPIIIEARKSVGAQDENDEDLKPIPW*

Click here to download the sequence:
Link to NCBI Protein BLAST