Transcript Information: S_Transcript_184106.p2


Annotated TAIR IDAT3G47470.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex I subunit A4
Annotated Gene Symbol(s)LHCA4, CAB4
Annotation TypeHomolog
Chromosome Positionchr3:17493622-17494773 | Reverse length=251
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.7304148672561
Replicate 30
Condition 2: 8 Hour
Replicate 10.13938163605969
Replicate 20
Replicate 30.41795779617611
Condition 3: 24 Hour
Replicate 10
Replicate 22.3700717988337
Replicate 30.16484996343213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184106.p2 GENE.S_Transcript_184106~~S_Transcript_184106.p2 ORF type:5prime_partial len:153 (+),score=-7.57,Chloroa_b-bind|PF00504.17|8.7e-14 S_Transcript_184106:2-460(+)
GGCCTGCCCAAGTGGTGGCTCGCCGGCGCTGAGAAGTACGCGATCGACAACAAGACGCTGGCGATCATCGAGGCCGCCACCTTTGCGGTGCTCGAGTACAAGCGCTACGACAACTTCAAGAAGAAGGGCCAGACAGGCTTCCTCGGCATGGCGCCCTTTGACCCCGCCGGCCTGAACAGCGACAAGATGCAGGAGCGGGAGGTGAAGAACGGGCGGCTTGCGATGGTTGCCTTCCTCGGCATCGCCAGCCAGGCCGCGGTGCGCGGCAAGGGCCCCGTTGACTGCCTCAAGGACCACATGGCGGACCCGGGCCACGTCAACATCTGCACAAGCAGCGTCGGCGTGGAGGCCACCGCCGCCGCGTGCGTGCTCGCGTTTGCGCCCATCATCATCGAGGCCCGCAAGAGCATCGGCGCCAGCGACGAGAACGACGAGGACCTGAAGCCCATCCCGTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184106.p2 GENE.S_Transcript_184106~~S_Transcript_184106.p2 ORF type:5prime_partial len:153 (+),score=-7.57,Chloroa_b-bind|PF00504.17|8.7e-14 S_Transcript_184106:2-460(+)
GLPKWWLAGAEKYAIDNKTLAIIEAATFAVLEYKRYDNFKKKGQTGFLGMAPFDPAGLNSDKMQEREVKNGRLAMVAFLGIASQAAVRGKGPVDCLKDHMADPGHVNICTSSVGVEATAAACVLAFAPIIIEARKSIGASDENDEDLKPIPW*

Click here to download the sequence:
Link to NCBI Protein BLAST