Transcript Information: S_Transcript_184118.p1


Annotated TAIR IDAT5G06270.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1912895-1913263 | Forward length=122
E-Value5.3E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65227944203874
Replicate 20.86520743362803
Replicate 30.6328389832608
Condition 2: 8 Hour
Replicate 12.1952607679402
Replicate 20.65799554822725
Replicate 30.94040504139624
Condition 3: 24 Hour
Replicate 10.21416552441759
Replicate 20.55548557785165
Replicate 30.49454989029639


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184118.p1 GENE.S_Transcript_184118~~S_Transcript_184118.p1 ORF type:complete len:204 (+),score=36.84 S_Transcript_184118:265-876(+)
ATGTCTTTGCATCTTCAAACCCCACAATATCATCCCCAACCAAAACAAAAACAATCTCATGTTGCTAGTGACAATAAGGTGGGGTGTACTTCTACTAATCACTCTCTAGACACCCTCGATCTCTTTGATACTAAACAATCTTCACCTTGGCTTAAATTCTTTCACCCTGAGAGTAATCAAAAGAGGTGGGAGGATCAAAATTTGGAGACCATGAGCAAGAGGAGTCATGGGAGCAACATTAACAACACCAACCCAAAGTTGGACTTGAAGCTGAACTTGTCGCCGCCGCCGCCGCCCGCGAGGAGGCAGGAATCACCTCCCCAGCGCTCGGCGTCGGTGTCACCGCCGAGCTCGTGCGTGTCATCGGAGATAAACGGCCAAGAAGACCACCAGCATCACGGTGGTGGTGGTGGTGGGCTAAGCCCAGAAGCCACCTCCATGATGCTGGTTGGGTGTCCAAGGTGCTTAATGTATGTGATGCTATCAGAAGATGATCCCAAGTGCCCCAAATGCAAGAGCACCGTGTTGCTTGATTTCCTCCATGACAACAACAACAACAACAACTGTAGTAGTAGTGTTAGTGGTAGCTCTAAGAAGACAAGGATGATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184118.p1 GENE.S_Transcript_184118~~S_Transcript_184118.p1 ORF type:complete len:204 (+),score=36.84 S_Transcript_184118:265-876(+)
MSLHLQTPQYHPQPKQKQSHVASDNKVGCTSTNHSLDTLDLFDTKQSSPWLKFFHPESNQKRWEDQNLETMSKRSHGSNINNTNPKLDLKLNLSPPPPPARRQESPPQRSASVSPPSSCVSSEINGQEDHQHHGGGGGGLSPEATSMMLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDNNNNNNCSSSVSGSSKKTRMI*

Click here to download the sequence:
Link to NCBI Protein BLAST