Transcript Information: S_Transcript_184350.p1


Annotated TAIR IDAT5G41620.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16646330-16648776 | Forward length=623
E-Value3.4E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0625080883677
Replicate 24.2739435268484
Replicate 33.958911934176
Condition 2: 8 Hour
Replicate 17.2573317833175
Replicate 26.0517217088266
Replicate 36.3240734604657
Condition 3: 24 Hour
Replicate 13.9267417094785
Replicate 24.2717131766938
Replicate 34.401752950282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184350.p1 GENE.S_Transcript_184350~~S_Transcript_184350.p1 ORF type:complete len:573 (+),score=116.43 S_Transcript_184350:213-1931(+)
ATGCATTTAGGTAATCATAATCACAGGATTCGTCGCCACTCTCATAGATCTTTGTTGAATAATAATAATAATGGTGGTAAAGATGAAGGAATTGAACATCACCATCATCTTCATCTTCATCATCAACATCCTGATGGTTCTGCCTCACCTGACCATCATCCTGCAAGCGCTGGCAGCCTGAGGAGACATATCGCAGCTTCTTTGATGAGGCATCATCAATCAGCAGAAAGGAACAAACATGCTTTGCAGCCTTTATCTCCTGCAAGTTATGGTAGCTCGTTAGAGATGGCTCCGTATAATCCAGCTGCCACTCCTGACAGTTCTATTGAATTAAGGGGGAGGATAGGTGAGTCTAGCTACAGCTTTAAAACATCTACTGAATTGCTGAAGGTTCTAAACCGTATATGGAGCCTCGAGGAACAACATGCATCTAATGTGTCTCTGGTGAAAGCACTGAAAAATGAGCTTGATCTTGCCCGTGCTAGGATCAAAGAATTACTCAGAGACCAGCACGCAAATCGCCATGAGATCGATGAGTTGATGAAACAAATCTCAGAAGATAACTTAGGCAGGAAGAGCAAAGAAAAAGAGCGAATTGATTCCGCTCTTCAGTCTATGAGGAACGAATTGGAAGATGAAAGGCGGTTGAGAAAACGGTCTGAAAGCTTGCATCGGAAGCTAGCTCGGGAGCTGTTTGAGATCAAAGTTGCCCTATCTACTACAGTCAAGGACCTCGAGAAACAAAGAAAATCAAGTGAGCTCTTAGAAGAACTTTGTGACGAGTTTGCCAAAGGTATAAGAGAATACGCAAGGCAGGTGCATGCTGTCAGACAGAAGTCTGACAAGGACTGGAGTGGCATGGCCGACCATGACAATTTGGTTCTACATATTTCAGAATCATGGCTTGATGAGCGAATGCAGATAAAAGATCGAGAAACACAGGATAAGACTGCCGAGAGATCCTCTGTTGTCGACAAATTGAGACATGAAATACAGGCTTTTCTTACAGCCCAACAAATGGCTCATGTGAGGAGCAAGGATACCTTGCCACATAGGGATCCCAAAGAGAGCCGTTTCAGGCACCAGTCTCTTGAGTCCATTCCTGAGGCAACGAGCGCACCTCAATGTGTAGGCCATGAAGATTCTGCCTTTTCTGATTCACGTTGTGTTGAGATAAGTAAAGCAGGGCCTCGTAATTACGAGGAGCAGGAAGAACTTGCTTTAAGCGGAAGGAGAAAGGGTCAGACTCCCCCTAGCATGCAGATGTCTGATCCTCAGAACACTCCACGCGAAATTGATGCGAGGATCATGAAAACCGGTGAAGAAACTCCAACTGAAATAAGCATGTTGCAAAAATCTGAAATCTATGATTCGATTCAAGAGGGGAACCAAAGAAAGAAGACTTACAATGAAGAAGGGCATGGTTCAAACTCAAAAACAGTCGATAAGCTGATGAGCGAGCTGCTTCTGTCAGAGGGTGGGAGTCACCCTTCTGAGTACGAGTACAAGGAAAAGGTTCCTTCTGCACATCCTGCACTGAGGAGGCATGTAAGCCCTGTCAGGCAGTGGATAACAAGTATGAAATCTCCTGATCCTCAAATTTCGGAATCATCCAAGAAAAGTCAGCCAGTGAGAGATAACACACTAAAAGCCAAGTTACAGGAACCCAAGTCAAAGGGGCAGCGATCGCGATTGAAAATCTTAAAGGGTTCATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184350.p1 GENE.S_Transcript_184350~~S_Transcript_184350.p1 ORF type:complete len:573 (+),score=116.43 S_Transcript_184350:213-1931(+)
MHLGNHNHRIRRHSHRSLLNNNNNGGKDEGIEHHHHLHLHHQHPDGSASPDHHPASAGSLRRHIAASLMRHHQSAERNKHALQPLSPASYGSSLEMAPYNPAATPDSSIELRGRIGESSYSFKTSTELLKVLNRIWSLEEQHASNVSLVKALKNELDLARARIKELLRDQHANRHEIDELMKQISEDNLGRKSKEKERIDSALQSMRNELEDERRLRKRSESLHRKLARELFEIKVALSTTVKDLEKQRKSSELLEELCDEFAKGIREYARQVHAVRQKSDKDWSGMADHDNLVLHISESWLDERMQIKDRETQDKTAERSSVVDKLRHEIQAFLTAQQMAHVRSKDTLPHRDPKESRFRHQSLESIPEATSAPQCVGHEDSAFSDSRCVEISKAGPRNYEEQEELALSGRRKGQTPPSMQMSDPQNTPREIDARIMKTGEETPTEISMLQKSEIYDSIQEGNQRKKTYNEEGHGSNSKTVDKLMSELLLSEGGSHPSEYEYKEKVPSAHPALRRHVSPVRQWITSMKSPDPQISESSKKSQPVRDNTLKAKLQEPKSKGQRSRLKILKGSS*

Click here to download the sequence:
Link to NCBI Protein BLAST