Transcript Information: S_Transcript_184457.p1


Annotated TAIR IDAT2G42610.1
Annotated Gene NameProtein of unknown function (DUF640)
Annotated Gene Symbol(s)LSH10
Annotation TypeOrtholog
Chromosome Positionchr2:17748005-17748538 | Forward length=177
E-Value3E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8542967306123
Replicate 20.76078584681086
Replicate 30.38157385000553
Condition 2: 8 Hour
Replicate 11.3236449162358
Replicate 21.2343088904677
Replicate 31.7640701466191
Condition 3: 24 Hour
Replicate 10
Replicate 20.31260429760479
Replicate 30.17394513382839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184457.p1 GENE.S_Transcript_184457~~S_Transcript_184457.p1 ORF type:complete len:145 (+),score=2.45,DUF640|PF04852.8|7.8e-47 S_Transcript_184457:248-682(+)
ATGTCAAGTAGCAGTATAATGATCAAGGGTAATGATATAGAGGATGATCAAGGACTGGGCCCATCGTCAGCTGACAAAGTCGGGGCCCAGTCCCCGATCAACAGGCAGCCGCCGAGCCGGTACGAGTCGCAGAAGCGGCGGGACTGGAACACCTTCAGCCAGTACCTGAAGAACCAGCGGCCGCCAGTAGGAGTGATGTCAGAGTGCAACCCAAGTCACGTGCTGGATTTCCTGCGGTACTTGGACCAGTTTGGTAAGACCAAAGTCCACTTTCAAGGGTGCATGTTTTTCGGGCAGCCTGAGCCGCCCGGACCATACACCTGCCCGCTAAAGCAGGCTTGGGGCAGCCTCGACGCTCTCATAGGCCGCCTTCGGGCGGCCTATGAGGAGAACGGGGCCCACCCGAGACCAACCCCTTTGCTAGTGGTGATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184457.p1 GENE.S_Transcript_184457~~S_Transcript_184457.p1 ORF type:complete len:145 (+),score=2.45,DUF640|PF04852.8|7.8e-47 S_Transcript_184457:248-682(+)
MSSSSIMIKGNDIEDDQGLGPSSADKVGAQSPINRQPPSRYESQKRRDWNTFSQYLKNQRPPVGVMSECNPSHVLDFLRYLDQFGKTKVHFQGCMFFGQPEPPGPYTCPLKQAWGSLDALIGRLRAAYEENGAHPRPTPLLVVI*

Click here to download the sequence:
Link to NCBI Protein BLAST