Transcript Information: S_Transcript_18469.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40322729144213
Replicate 22.1728504867249
Replicate 31.3971769760304
Condition 2: 8 Hour
Replicate 10.48466796175302
Replicate 21.525353316345
Replicate 31.4533532457942
Condition 3: 24 Hour
Replicate 13.1443392903128
Replicate 21.5452598802055
Replicate 32.6750653156941


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18469.p1 GENE.S_Transcript_18469~~S_Transcript_18469.p1 ORF type:complete len:132 (+),score=-0.26,PIF1|PF05970.10|4.2e-15 S_Transcript_18469:1767-2162(+)
ATGATAGCCAACTTCCCGGGTCAAGAACATAACTATAAGAGCTTTGACACCACTGTTGATGACGAGTGCAATGCTCATCCGATTGAGTTCCTCGATACTCTTTGTCCCGGAGGAATGAGTCCACATAATTTGACGTTGAAGCTCAATTGTCCAGTTATATTACTGTGTAATCTGAACCCAGCACTAGGCCTGTGCAATGGAACTCGACTGATTTGCAGAGGGTTCAAGCCAAATCTGGTTATATGTGAAATCGCAACTGGATATCGTTGTGGTGATTATGTCTTCATCCCCCGAATAAACCTCAGACCCTCAAGTTCCAGCACATATCCCTACAGATTTGAGCGGCGCCAGTTCCCGATTAAACTATGCTTCGCAATGGCCATAAATAAATCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18469.p1 GENE.S_Transcript_18469~~S_Transcript_18469.p1 ORF type:complete len:132 (+),score=-0.26,PIF1|PF05970.10|4.2e-15 S_Transcript_18469:1767-2162(+)
MIANFPGQEHNYKSFDTTVDDECNAHPIEFLDTLCPGGMSPHNLTLKLNCPVILLCNLNPALGLCNGTRLICRGFKPNLVICEIATGYRCGDYVFIPRINLRPSSSSTYPYRFERRQFPIKLCFAMAINKS*

Click here to download the sequence:
Link to NCBI Protein BLAST