Transcript Information: S_Transcript_18470.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9879252779156
Replicate 28.0896895044221
Replicate 310.297194313344
Condition 2: 8 Hour
Replicate 15.5090591652594
Replicate 25.9658263039271
Replicate 33.5526412674969
Condition 3: 24 Hour
Replicate 19.1020347877476
Replicate 29.6321199199476
Replicate 310.92955257555


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18470.p1 GENE.S_Transcript_18470~~S_Transcript_18470.p1 ORF type:complete len:120 (+),score=9.30,Herpes_Helicase|PF02689.10|5.1e-07 S_Transcript_18470:3312-3671(+)
ATGACCATAAATAAATCTCAAGGCCAAACTCTAACACAAGTAGCCATCTACCTTGGAAAACAATGCTTCTCACATGGCCAGCTCTATGTGGCACTCTCCAGAGCTAAAAAGGCAAGTACTATAAAGGTTTTTGTTGATACTGCTAAGGATGGTGAAGCGGACTCAGCATGCGTTACAAATGTCATTTCATTCGATCTACTTAGAAGGGAAGGGATTATTTTAAATGACTTTCAGGTATGTGCATTTTTTGGCCTACTTACCATCTTTAACAGTTTGGCCAATGCCAATATGTTTGCACTCTTTACAAACAATAAAGTGAGGATAGTGTATATGACATACTTCTACTCATCATCTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18470.p1 GENE.S_Transcript_18470~~S_Transcript_18470.p1 ORF type:complete len:120 (+),score=9.30,Herpes_Helicase|PF02689.10|5.1e-07 S_Transcript_18470:3312-3671(+)
MTINKSQGQTLTQVAIYLGKQCFSHGQLYVALSRAKKASTIKVFVDTAKDGEADSACVTNVISFDLLRREGIILNDFQVCAFFGLLTIFNSLANANMFALFTNNKVRIVYMTYFYSSSD*

Click here to download the sequence:
Link to NCBI Protein BLAST