Transcript Information: S_Transcript_184858.p1


Annotated TAIR IDAT4G33625.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16153114-16154543 | Reverse length=200
E-Value6.1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66950946503599
Replicate 20
Replicate 30.34797615252077
Condition 2: 8 Hour
Replicate 10.80473171008049
Replicate 20.42211035169296
Replicate 30.93843354235767
Condition 3: 24 Hour
Replicate 10.41216761303008
Replicate 20
Replicate 31.1104044706655


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184858.p1 GENE.S_Transcript_184858~~S_Transcript_184858.p1 ORF type:complete len:159 (+),score=2.88,COPI_assoc|PF08507.6|6.9e-10 S_Transcript_184858:189-665(+)
ATGGCTAGGAATGAAGAAATCTCACCAACGCCGCCACCACCACCACCACAACAACAAGAACATCAACCGATACAACGAACCTCAAGCTCAGGATCACAATCAAATAGACGAACCTCCAATAACGTTCGATTGAGACCTAGAGCTGACCACTTGTTGATCGTCTGTAGGTGTTTCAGCATTATCACTATCATCTCCGCCATTCTCTGCATTTCTGTTAACGTTATCTCTGCCATTCGTTCCTTCAAGAACGCATCTGATGTATTTGACGGAATATTTCGATGCTATGCTGTGGCGCTAGCTCTTTTTGTGGCAGTCGCTGAGACCGAATGGAGTCTCATTTTCAAATTCTGGAAGGTGTTAGAGTATTGGCCAGGGAGAGGCATGCTGCAGATCTTGTATGAATTACAGCTCCACAGTACTACATATGTGTATCATAACTCTATAATTACGTATCTGCTATGGTTTCTCTTAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184858.p1 GENE.S_Transcript_184858~~S_Transcript_184858.p1 ORF type:complete len:159 (+),score=2.88,COPI_assoc|PF08507.6|6.9e-10 S_Transcript_184858:189-665(+)
MARNEEISPTPPPPPPQQQEHQPIQRTSSSGSQSNRRTSNNVRLRPRADHLLIVCRCFSIITIISAILCISVNVISAIRSFKNASDVFDGIFRCYAVALALFVAVAETEWSLIFKFWKVLEYWPGRGMLQILYELQLHSTTYVYHNSIITYLLWFLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST