Transcript Information: S_Transcript_184882.p1


Annotated TAIR IDAT5G51170.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20793906-20795330 | Reverse length=285
E-Value6E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2363866584185
Replicate 23.3372286725653
Replicate 32.2472241446404
Condition 2: 8 Hour
Replicate 14.2113165752321
Replicate 23.8539739253311
Replicate 34.0303073202696
Condition 3: 24 Hour
Replicate 13.8549794395166
Replicate 22.4758785755674
Replicate 32.1194995298417


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184882.p1 GENE.S_Transcript_184882~~S_Transcript_184882.p1 ORF type:complete len:238 (+),score=56.61,HVSL|PF09749.5|8.3e-32 S_Transcript_184882:55-768(+)
ATGTTGATTTACAAAGGCGAAGTCGAAGCCGAACTGCAGAAGGTTAGCAACTTAGCACCAGCAGCAGCAGCAAAAAAAGAAGAACCAACAATGGATGCTTTGATTGCATCGTATGGAGATTCATCATCATCAGATTCTGACTCAGAACAACCTTCCTGCTGTTCTTCATCAACAATATCTTCCTTATCTCAGAACACAAACCCTTCTCCTCTCCCTCCACCTCCACTTTCTCTTCTAACCCCACCTAATTCCCTCACTGGTACTCTTGATTTTTCACAAACGGATCAGCCTAGTCGGGTTCGGAGCTTCCCCCATGTTGAAGGCAATTATGCTTTACATGTTTTTATCCCAGTTCGTGTACCACAAGCTGCAAGGAAGGAAGCAGCTCAGTTCTTGAAGAGAGTCTCATTTAATGTTCCTGGTCTTCATGTTGTTGATGTTGATGTACCGTTTGACAATCTCAGATATGATGACCAGAAACTTGAACAGATTGCCTTGGGGAGGGAATTCCATATAAGTTTGGGAAGGACTGTTCCCATTAGGGTGCATCAAATTGATTCAATGGTCACTATGCTTCGCCAGAAGCTACAATGTCAGAAGCGGTATTGGATAGATTTCAGCAAGTGGGAGGTTTTTTTAAATGATGATTGCACACGCACCTTTCTTTCAGCAGAAGTCATTACAGGAGGCTTGTCTGAGGTAAAGTTGATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184882.p1 GENE.S_Transcript_184882~~S_Transcript_184882.p1 ORF type:complete len:238 (+),score=56.61,HVSL|PF09749.5|8.3e-32 S_Transcript_184882:55-768(+)
MLIYKGEVEAELQKVSNLAPAAAAKKEEPTMDALIASYGDSSSSDSDSEQPSCCSSSTISSLSQNTNPSPLPPPPLSLLTPPNSLTGTLDFSQTDQPSRVRSFPHVEGNYALHVFIPVRVPQAARKEAAQFLKRVSFNVPGLHVVDVDVPFDNLRYDDQKLEQIALGREFHISLGRTVPIRVHQIDSMVTMLRQKLQCQKRYWIDFSKWEVFLNDDCTRTFLSAEVITGGLSEVKLM*

Click here to download the sequence:
Link to NCBI Protein BLAST