Transcript Information: S_Transcript_184887.p1


Annotated TAIR IDAT5G51170.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20793906-20795330 | Reverse length=285
E-Value5.2E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1975482328502
Replicate 25.1379098969555
Replicate 34.8633242412234
Condition 2: 8 Hour
Replicate 16.0616691654864
Replicate 26.8188168799167
Replicate 37.7379446785206
Condition 3: 24 Hour
Replicate 15.9848995864642
Replicate 23.9584054465538
Replicate 34.8371044064606


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184887.p1 GENE.S_Transcript_184887~~S_Transcript_184887.p1 ORF type:complete len:292 (+),score=59.16,HVSL|PF09749.5|8.7e-56 S_Transcript_184887:143-1018(+)
ATGGATGCTTTGATTGCATCGTATGGAGATTCATCATCATCAGATTCTGACTCAGAACAACCTTCCTGCTGTTCTTCATCAACAATATCTTCCTTATCTCAGAACACAAACCCTTCTCCTCTCCCTCCACCTCCACTTTCTCTTCTAACCCCACCTAATTCCCTCACTGGTACTCTTGATTTTTCACAAACGGATCAGCCTAGTCGGGTTCGGAGCTTCCCCCATGTTGAAGGCAATTATGCTTTACATGTTTTTATCCCAGTTCGTGTACCACAAGCTGCAAGGAAGGAAGCAGCTCAGTTCTTGAAGAGAGTCTCATTTAATGTTCCTGGTCTTCATGTTGTTGATGTTGATGTACCGTTTGACAATCTCAGATATGATGACCAGAAACTTGAACAGATTGCCTTGGGGAGGGAATTCCATATAAGTTTGGGAAGGACTGTTCCCATTAGGGTGCATCAAATTGATTCAATGGTCACTATGCTTCGCCAGAAGCTACAATGTCAGAAGCGGTATTGGATAGATTTCAGCAAGTGGGAGGTTTTTTTAAATGATGATTGCACACGCACCTTTCTTTCAGCAGAAGTCATTACAGGAGGCTTGTCTGAGATAACGAAGCAGATTCAAGCTGTCAATGAAGTGTATAGGCTTCACAATCTTCCCGAGTTTTACAAGGATCCGCGTCCTCATATATCATTGGCATGGGCATTGGGCAATGTTAGTGCTTTGCTTCAAAGAGTGGTTGGAGAAGAGACGAAGAAACATCCGAATGTTGTGGGATCATTACAACAACGGGTTTTTACTGTTAAATTCAGCGGTATAGAGTGCAAAATAGGTAATAAGACTTACAAAATTTGTAAAGTACCAGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184887.p1 GENE.S_Transcript_184887~~S_Transcript_184887.p1 ORF type:complete len:292 (+),score=59.16,HVSL|PF09749.5|8.7e-56 S_Transcript_184887:143-1018(+)
MDALIASYGDSSSSDSDSEQPSCCSSSTISSLSQNTNPSPLPPPPLSLLTPPNSLTGTLDFSQTDQPSRVRSFPHVEGNYALHVFIPVRVPQAARKEAAQFLKRVSFNVPGLHVVDVDVPFDNLRYDDQKLEQIALGREFHISLGRTVPIRVHQIDSMVTMLRQKLQCQKRYWIDFSKWEVFLNDDCTRTFLSAEVITGGLSEITKQIQAVNEVYRLHNLPEFYKDPRPHISLAWALGNVSALLQRVVGEETKKHPNVVGSLQQRVFTVKFSGIECKIGNKTYKICKVPDD*

Click here to download the sequence:
Link to NCBI Protein BLAST