Transcript Information: S_Transcript_184918.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.099674161929515
Replicate 20.082632170627396
Replicate 30.069073917916107
Condition 2: 8 Hour
Replicate 10.3194815028784
Replicate 20.25136908583962
Replicate 30.23950390567395
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_184918.p2 GENE.S_Transcript_184918~~S_Transcript_184918.p2 ORF type:complete len:267 (+),score=45.57,rve|PF00665.22|7.6e+03,rve|PF00665.22|1.7e-11,gag_pre-integrs|PF13976.2|4.7e+02,gag_pre-integrs|PF13976.2|5.2e-08 S_Transcript_184918:2761-3561(+)
ATGATTCTTCTGGTTCTTCTTCTGCTGTTAATTTTGCAGGGCCTTTCTCTGAAGAGGCCTCAGGCTCTTGGTAATGTGCATGGAGGATTATATCTCTTTCACCTGCCACCTGTTTTTCAACAACAATCTGTTCCAGTTATGTCTTCTGCCTGTACAGAGAATCAGTCTACTCTTGTTTGCGATCATGTCAATCTAGTTCATTCTGTACTTGATGTTACATCTTGTAATACTTGTACTGAACATGTTGCTCATGATGGTAATAAAACTGTTCTTGACTCTGATTGTTCTAATGATTCTGTTATGCATTGTCATGTTTCTGTGTCAGATAATTTTCTTCTTTGGCATAAAAGGCTTGGCCATTTACCCTTCTATAAACTCAAAACTCTCCCTTTTCTTCATGGTTCCATTAATCCCCCTTCCATTCCCTGTGATATTTGTCCTAAAGCCAGACAGCACCATTTGCCTTTTCCTTCAAGCTCAATTAAAACATCTTCCCCTTTTGATCTTATTCACATCGATTTGTGGGGACCTTATCATGCCAAGACTTATAATGGATACTCTTACTTTCTTACTATTGTTGATGATTTTACAAGAAACACTTGGACTCATTTACTTCAAACAAAGAGCAATGCATGGGGTCTTATTGTTGCTTTTATCCAGTTAATTGCTACTCAATTCAATGCTACTATCAAAGTCATAAGATCAGATAATGCTTTAGAACTTGGCTCAAGCAAGGCTGCTATCCAATTTTTCAAGGATAAAGGGATTTTACACCAAACCAGTCTTAGAGCTACTCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_184918.p2 GENE.S_Transcript_184918~~S_Transcript_184918.p2 ORF type:complete len:267 (+),score=45.57,rve|PF00665.22|7.6e+03,rve|PF00665.22|1.7e-11,gag_pre-integrs|PF13976.2|4.7e+02,gag_pre-integrs|PF13976.2|5.2e-08 S_Transcript_184918:2761-3561(+)
MILLVLLLLLILQGLSLKRPQALGNVHGGLYLFHLPPVFQQQSVPVMSSACTENQSTLVCDHVNLVHSVLDVTSCNTCTEHVAHDGNKTVLDSDCSNDSVMHCHVSVSDNFLLWHKRLGHLPFYKLKTLPFLHGSINPPSIPCDICPKARQHHLPFPSSSIKTSSPFDLIHIDLWGPYHAKTYNGYSYFLTIVDDFTRNTWTHLLQTKSNAWGLIVAFIQLIATQFNATIKVIRSDNALELGSSKAAIQFFKDKGILHQTSLRATP*

Click here to download the sequence:
Link to NCBI Protein BLAST