Transcript Information: S_Transcript_185093.p1


Annotated TAIR IDAT5G41270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16507797-16508813 | Forward length=258
E-Value7E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.12295157389067
Condition 2: 8 Hour
Replicate 10.14216926878089
Replicate 20.29829131519635
Replicate 30.28421130139975
Condition 3: 24 Hour
Replicate 10
Replicate 20.15109207717565
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185093.p1 GENE.S_Transcript_185093~~S_Transcript_185093.p1 ORF type:3prime_partial len:150 (+),score=24.17,Rpr2|PF04032.12|1.5e-08 S_Transcript_185093:217-663(+)
ATGGGCAAGCGAGGAGGAGGTGCAACAACATCCTCCTCATCTGGGCTTCTTCACACTCACACACAGCTGTCTCTTAGAGAAGAAGCCAGTGGGAGAAAGCAATCCCACAATCCTAAATCCATATTGAAACTCAAGCACCTCCAGAACTTAGCTCAGCGGGCTGCTTCTGTTCCCTCTTTGGGTTCCTTCTATGGTCGCCGTTCCGCTGAGTTTGGCGAGGTTTTGGGGATTTCCCCTAACCATTCTCTCTTTCCTTGTCAGAGATGCGAAGTTATTCTTCAATCTGGTTTCAACTGTAGTGTGAGAATTGAAAAAAACAGAAGCAAGAAGAGGCGACGATGCAGCAAAACTAATTCACCTACACAAAATAATGTGGTTTGCAATTGCCACTTGTGTTGGCACCGGAACCTAAAAAGAGGGAGTCCTAAAGGTTACATAAGGGAGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185093.p1 GENE.S_Transcript_185093~~S_Transcript_185093.p1 ORF type:3prime_partial len:150 (+),score=24.17,Rpr2|PF04032.12|1.5e-08 S_Transcript_185093:217-663(+)
MGKRGGGATTSSSSGLLHTHTQLSLREEASGRKQSHNPKSILKLKHLQNLAQRAASVPSLGSFYGRRSAEFGEVLGISPNHSLFPCQRCEVILQSGFNCSVRIEKNRSKKRRRCSKTNSPTQNNVVCNCHLCWHRNLKRGSPKGYIREM

Click here to download the sequence:
Link to NCBI Protein BLAST