Transcript Information: S_Transcript_185094.p2


Annotated TAIR IDAT5G41270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16507797-16508813 | Forward length=258
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0484093716319
Replicate 25.2148411681399
Replicate 33.8562084538438
Condition 2: 8 Hour
Replicate 14.0712108787254
Replicate 24.881130612304
Replicate 33.1004869243609
Condition 3: 24 Hour
Replicate 14.1703868482043
Replicate 23.9146583631873
Replicate 33.6686610043805


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185094.p2 GENE.S_Transcript_185094~~S_Transcript_185094.p2 ORF type:3prime_partial len:110 (+),score=33.21 S_Transcript_185094:217-543(+)
ATGGGCAAGCGAGGAGGAGGTGCAACAACATCCTCATCTGGGCTTCTTCACAGTCACACACAACTCTCTCTTAGAGAAGAAGCCAGTGGGAGAAAGCAATCCCACAATCCTAAATCCATATTGAAACTCAAGCACCTCCAGAAGATAGCTCAGTGGGCTGCTTATGTTCCCTCTTTGGATTCCTTCTATGGCCGCCGTTTTGCTGAGTTTGGCGAGGCTCTGGGGATTTCCCCTGACCATTCTCTCTTTCTTTGCCAGAGGACATGGAAGTTGATGAAGAACTTGAAGAATCCATGGGTTTTTGAGGAAAATGGAGAGCATAAGGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185094.p2 GENE.S_Transcript_185094~~S_Transcript_185094.p2 ORF type:3prime_partial len:110 (+),score=33.21 S_Transcript_185094:217-543(+)
MGKRGGGATTSSSGLLHSHTQLSLREEASGRKQSHNPKSILKLKHLQKIAQWAAYVPSLDSFYGRRFAEFGEALGISPDHSLFLCQRTWKLMKNLKNPWVFEENGEHKG

Click here to download the sequence:
Link to NCBI Protein BLAST