Transcript Information: S_Transcript_185195.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeHomolog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value9E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6975908540596
Replicate 21.4289932392502
Replicate 31.2126234716401
Condition 2: 8 Hour
Replicate 12.8461757439942
Replicate 23.3590705023338
Replicate 32.5311261631038
Condition 3: 24 Hour
Replicate 11.5220674463515
Replicate 21.2899912379079
Replicate 31.237588047356


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185195.p1 GENE.S_Transcript_185195~~S_Transcript_185195.p1 ORF type:complete len:1019 (+),score=222.83,JmjC|PF02373.18|5.4e-16,zf-4CXXC_R1|PF10497.5|1.2e+04,zf-4CXXC_R1|PF10497.5|5e+03,zf-4CXXC_R1|PF10497.5|1.6e-06,zf-4CXXC_R1|PF10497.5|1.6e+04 S_Transcript_185195:94-3150(+)
ATGCTCGATCACCTGACTGAAGTGGAAATTGTGGAAGAGCAGTGCAAGAGTAACGGGAAATTGGCTGACAATTTGTGCTGTGAAAGGAACAACGGAACGTTGTGGAGGTGCAAGAAACGTAAGGCTGAGGGTCAAAGACTGTGCCTTTATTCACCATTGGGAATGGGATTCTCGGCATGGAAGAAGAAACCCCATAATTCTCAAGAGTCAGAATTAGTTGATCGTGTAGCGGAAAAGCCCCCTTCTAAAATCGAAAGCAAAGAAGTTAAATTTAAGGGAATGTATGGGCGGGAAAAACGAACTCGAGGGAGTGCCAAGAGAAGTGAGGATCTTACTGAGGAAGAGATGACACGTCACAGGGGCCGTAGAATCTTGCAAAGGGAGACACAAGATGATGTGGGTATTGGGCTTCTTCATGGTAGAGGAGAAGATGAGGAAGAAACGCGATGCACACCAGGTGTTTGTGAAAATGCCGCAGAGAAAAACGATGGTTTTGGTGGTTCCAAGGAGGTCAGCAACGGAAAGGAGATGGACCCAATTGTTGATGAGGAAAGTATGAGTATTGAGCATGTTGAGGATGAGGTTGAAGGTGAGGAAGAGGGGATTGAGGAAGGGTTGGGAAAGGGCACAACAAGTGCTTGTGAAAATGTCTCAGAGAAGAATGTAGGGTACGTTGAGGATGAAGGCGGAAACGAGAAGGAAGAGGATGTGCAGGAAATCAGAGAGGGAGACGACGAGGTGGAAGAAGACGGTGGGCATAAGGTGGAAAAGTGCACATCAGGTGTTTGTGAAAATGCCAAAGTTGGTGAACAAAGTTGGAAGGAATCTGCTTCCGTAATGGGGACGGAATCTGCTTATTCTAGTTGTAATGAGATGAGAAAGCCAAAGCGAAGGGGCTCACTCGTTGATGAGAATGGGATCCTTATTGGTTCAATGATGTGTCATCAGTGCCAAAGGAATGATAAGGGAGAAGTGATCAGGTGTACCAAATGCAAGACTAGACGGTTTTGTAAACCCTGCATTCAGAACTGGTATCCCAAAATGAAAGAGGGAGATATTGCTCATGCTTGCCCAGTCTGCCGTAGCAACTGCAACTGCCGGGCATGCTTGCGACTATATGGAGCCATCAGAGGGCAGTTGAAGCAATATTTGAACATTAGCATAGAAAAAAAGATTGAGCATTCCAAATATCTGCTGAGGAAAATGTTGCCGTTTCTGAAGCAATTCAATGAGGAACAGTTGTTAGAAAAGGAGATGGAGGCCAAAATTAAGGGTGTTTCAGCATCTGAAATAAAATTGCCAAGAAAATTGAGTTCAAAAAATGATCGTACATGCTGCAACAATTGCAGAGCTTCGATTGTTGATTTTCACAGAAGTTGTCCCAAGTGTAAATATGATTTGTGTCTTACGTGCTGCCAGGAAATTCGTGCCAGACAACTGGAGGAAGCGAATCTGGAATCTGTTAAGAGATTGGTAGAGAGTAAGAGAAATGCCAAACCTAGGAGAACCGCTAGACGCACATGCCATGATGTGGAACTTGTTAATCAGGCTAATGGAAAACCTGAGTGGAAAGCCGATAAAAAGGGTACTATACCATGCCCACCTGCAGAATTTGGTGGTTGCAATGCTGGCCATCTTAAATTAAAATCTATCTGCTTAGATGGTCAGGTTTCAGAATTGCTGAGGAAAGCTGAGCAAATAGCTGTCGATTGGGGACTTGAAAATTTGTCCCAGGCTCCCTCCAATGGTTGCTGCTCATGCTCTAATTCTACGATCGATGACAACATTGGCACTGAAAGGAATTTGCTGAAATGTGCTTGCAGAGACAGAGAAGGCTCTGATGACAACTCTTTGTATTGTCCAGATGCTAGAGATCTTCAACATGGAGATCTGAAACATTTTCAATGGCATTGGGCCAGAGGAGAACCAATAATTGTCAGGCATGTTCTTGAAACTACCTCTGGTTTAAGTTGGGAGCCACTGGTCATGTGGCGTGCTTTCCGTCAAATAAAAAGCACCAAACATTCCACGCTAGATGATTTTAAAGTCATTGATTGCTCAAATTTGACTGAAGCTTCTGTCAACCTCCACCAATTTTTTGATGGGTATTCTAAAGGTCGGTTTGACCGGTGGGAAGCACCTATCTTGTTGAAATTGGAGAATTCGTCACCAGCTGGTGACTTGGAGGCTCGTTCGCCACGCCATGCTGTCGAATTCATTTGTGCGTTGCCATTTAAGGAGTACACACATCCCAGCAATGGCACTCTGAACCTTCCTGCTAAGCTGCAGTACAGTACTGGGAGGACAGGCTTGGGCCCAAAAATTTTTATTGCTTACGGATATCCTCAGGAGTTGGGTTGTCGAGACTCGGTTACTATGCTTCACTCTGAGATTTCTGATACGGTCAATATTATGACACATATTAGAGAAGTTCCTGAGATTGGTAAACATAAGGTCAAAGTGAGAGAAGATCCTGATAAATGTCGTGAAAACGAAGCCTCAGCTCATGCATATGGTAGTGTTTTATCAGAGCATTATGGTGGAGGCTCTCTTTGGGACATCTTTAGACGGGAAGATGTCCCCAAGCTCGAGGAGTATCTTAGAAAGCATGATCTGGAGTTGAGGGACATTCAACATTTTCAATCGAAGAAAACCATACACCCTATTCATGATCAGACATTTTACTTAACTGAGGCACATAAAAGGAAGCTCAAAGAAGAATTTGGTATCAAGGCATGGACATTTGTCCAAAAACTCGGAGAAGCAGTCTTCATACCTGCTGGCTGTCCTTATCAGGTCAGAAATTTGAGCCCATGCATCAATGTTGCACTTGGTTTTGTATCACCTGAGAATCTTCAAGAGTGTATTCGTCTTGCTGAAGAGTTCCGTTTTCTGCCCCATGATCACAGGGCTAAGGAGGATAAATTGATGGTCAAGGAAATGATCTTTTTCGCTGTCAAGCGGGTTGTTGAAGATTTGGGACAGCATCCTAAATTTAATAGTATGAAAGAAAAGGCTTTCAGTCTGTCTTTTCTTCGTACAGAATCTAGGGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185195.p1 GENE.S_Transcript_185195~~S_Transcript_185195.p1 ORF type:complete len:1019 (+),score=222.83,JmjC|PF02373.18|5.4e-16,zf-4CXXC_R1|PF10497.5|1.2e+04,zf-4CXXC_R1|PF10497.5|5e+03,zf-4CXXC_R1|PF10497.5|1.6e-06,zf-4CXXC_R1|PF10497.5|1.6e+04 S_Transcript_185195:94-3150(+)
MLDHLTEVEIVEEQCKSNGKLADNLCCERNNGTLWRCKKRKAEGQRLCLYSPLGMGFSAWKKKPHNSQESELVDRVAEKPPSKIESKEVKFKGMYGREKRTRGSAKRSEDLTEEEMTRHRGRRILQRETQDDVGIGLLHGRGEDEEETRCTPGVCENAAEKNDGFGGSKEVSNGKEMDPIVDEESMSIEHVEDEVEGEEEGIEEGLGKGTTSACENVSEKNVGYVEDEGGNEKEEDVQEIREGDDEVEEDGGHKVEKCTSGVCENAKVGEQSWKESASVMGTESAYSSCNEMRKPKRRGSLVDENGILIGSMMCHQCQRNDKGEVIRCTKCKTRRFCKPCIQNWYPKMKEGDIAHACPVCRSNCNCRACLRLYGAIRGQLKQYLNISIEKKIEHSKYLLRKMLPFLKQFNEEQLLEKEMEAKIKGVSASEIKLPRKLSSKNDRTCCNNCRASIVDFHRSCPKCKYDLCLTCCQEIRARQLEEANLESVKRLVESKRNAKPRRTARRTCHDVELVNQANGKPEWKADKKGTIPCPPAEFGGCNAGHLKLKSICLDGQVSELLRKAEQIAVDWGLENLSQAPSNGCCSCSNSTIDDNIGTERNLLKCACRDREGSDDNSLYCPDARDLQHGDLKHFQWHWARGEPIIVRHVLETTSGLSWEPLVMWRAFRQIKSTKHSTLDDFKVIDCSNLTEASVNLHQFFDGYSKGRFDRWEAPILLKLENSSPAGDLEARSPRHAVEFICALPFKEYTHPSNGTLNLPAKLQYSTGRTGLGPKIFIAYGYPQELGCRDSVTMLHSEISDTVNIMTHIREVPEIGKHKVKVREDPDKCRENEASAHAYGSVLSEHYGGGSLWDIFRREDVPKLEEYLRKHDLELRDIQHFQSKKTIHPIHDQTFYLTEAHKRKLKEEFGIKAWTFVQKLGEAVFIPAGCPYQVRNLSPCINVALGFVSPENLQECIRLAEEFRFLPHDHRAKEDKLMVKEMIFFAVKRVVEDLGQHPKFNSMKEKAFSLSFLRTESRV*

Click here to download the sequence:
Link to NCBI Protein BLAST