Transcript Information: S_Transcript_185197.p1


Annotated TAIR IDAT3G07610.3
Annotated Gene NameTranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)IBM1
Annotation TypeHomolog
Chromosome Positionchr3:2426148-2432876 | Forward length=1049
E-Value2E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53824047441938
Replicate 20.24789651188219
Replicate 30.24866610449799
Condition 2: 8 Hour
Replicate 11.0542889594987
Replicate 20.45246435451132
Replicate 30.86221406042621
Condition 3: 24 Hour
Replicate 10.2454481291078
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185197.p1 GENE.S_Transcript_185197~~S_Transcript_185197.p1 ORF type:5prime_partial len:445 (+),score=81.56,zf-4CXXC_R1|PF10497.5|5e-07,zf-4CXXC_R1|PF10497.5|83,zf-4CXXC_R1|PF10497.5|1.5e+03 S_Transcript_185197:1-1335(+)
GGTGTTTGTGAAAATGCCAAAGTGAGTGAACAAACTTGGAAGGAATCTGCTTCTGTAATGTGGACGGAATCTGCTTATTCTAGTTGTAATGAGATGAGAAAGCCAAAGCGAAGGGGCTCACTCGTTGATGAGAATGGGATCCTTATTGGTTCAATGATGTGTCATCAGTGCCAAAGGAATGATAAGGGAGAAGTGATCAGGTGTACCAAATGCAAGACTAGACGGTTTTGTAAACCCTGCATTCAGAACTGGTATCCCAAAATGAAAGAGGGAGATATTGCTCATGCTTGCCCAGTCTGCCGTAGCAACTGCAACTGCCGGGCATGCTTGCGACTATATGGAGCCATCAGAGGGCAGTTGAAGCAATATTTGAACATTAGCATAGAAAAAAAGATTGAGCATTCCAAATATCTGCTGAGGAAAATGTTGCCGTTTCTGAAGCAATTCAATGAGGAACAGTTGTTAGAAAAGGAGATGGAGGCCAAAATTAAGGGTGTTTCAGCATCTGAAATAAAATTGCCAAGAAAATTGAGTTCAAAAAATGATCGTACATGCTGCAACAATTGCAGAGCTTCGATTGTTGATTTTCACAGAAGTTGTCCCAAGTGTAAATATGATTTGTGTCTTACGTGCTGCCAGGAAATTCGTGCCAGACAACTGGAGGAAGCGAATCTGGAATCTGTTAAGAGATTGGTAGAGAGTAAGAGAATCGCCAAACCTAAGAGAACAACTAGACGCACGTGCCATGATGTGGAACTTGTTAATCAGGCTAATGGAAAACCTGAGTGGAAAGCCGATAAAAAGGGTACTATACCATGCCCACCTGCAGAATTTGGTGGTTGCAATGCTGGCCATCTTAAATTAAAATCTATCTGCTTAGATGGTCAGGCTTCAGAATTGCTGAGGAAAGCCGAGCAAATAGCTGTCAACTGGGGACTTGAAAATTTGCCCCAGGCTCCCTCCAATGGTTGCTGCTCATGCTCTAATTCTATGATCGATGATGACATTGGCACTGAAAGTAATTTGGTGAAATGTGCTTGCAGAGACAGAGAAGGCTCTGATGACAACTCTTTGTATTGTCCAGATGCTAGAGATCTTCAACATGGAGATCTGAAACATTTTCAATGGCATTGGGCCAGAGGAGAACCAATAATTGTCAGGCATGTTCTTGAAACTACCTCTGGTTTAAGTTGGGAGCCACTGGTCATGTGGCGTGCTTTCCGTCAAATAAAAAGCACCAAACATTCCACGCTAGATGATTTTAAAGTCATTGATTGCTCAAATTTGACCCGAAGCTTCTGTCAACCTCCTCCAATTTTTTGTTCGGTATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185197.p1 GENE.S_Transcript_185197~~S_Transcript_185197.p1 ORF type:5prime_partial len:445 (+),score=81.56,zf-4CXXC_R1|PF10497.5|5e-07,zf-4CXXC_R1|PF10497.5|83,zf-4CXXC_R1|PF10497.5|1.5e+03 S_Transcript_185197:1-1335(+)
GVCENAKVSEQTWKESASVMWTESAYSSCNEMRKPKRRGSLVDENGILIGSMMCHQCQRNDKGEVIRCTKCKTRRFCKPCIQNWYPKMKEGDIAHACPVCRSNCNCRACLRLYGAIRGQLKQYLNISIEKKIEHSKYLLRKMLPFLKQFNEEQLLEKEMEAKIKGVSASEIKLPRKLSSKNDRTCCNNCRASIVDFHRSCPKCKYDLCLTCCQEIRARQLEEANLESVKRLVESKRIAKPKRTTRRTCHDVELVNQANGKPEWKADKKGTIPCPPAEFGGCNAGHLKLKSICLDGQASELLRKAEQIAVNWGLENLPQAPSNGCCSCSNSMIDDDIGTESNLVKCACRDREGSDDNSLYCPDARDLQHGDLKHFQWHWARGEPIIVRHVLETTSGLSWEPLVMWRAFRQIKSTKHSTLDDFKVIDCSNLTRSFCQPPPIFCSVF*

Click here to download the sequence:
Link to NCBI Protein BLAST