Transcript Information: S_Transcript_185307.p1


Annotated TAIR IDAT1G72175.1
Annotated Gene NameRING/U-box protein with domain of unknown function (DUF 1232)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27157978-27159359 | Forward length=185
E-Value1.5E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.747836984208
Replicate 215.596109859622
Replicate 313.991041166869
Condition 2: 8 Hour
Replicate 119.02739567089
Replicate 222.564709403862
Replicate 319.662031842526
Condition 3: 24 Hour
Replicate 111.581554609237
Replicate 216.020970252246
Replicate 316.198640587769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185307.p1 GENE.S_Transcript_185307~~S_Transcript_185307.p1 ORF type:5prime_partial len:232 (-),score=21.70,DUF1232|PF06803.8|4.3e-08 S_Transcript_185307:160-855(-)
CCACACTCACGAAGAAATACACCAGAGGCAGAAACAGCGAGGAAATTCAGACACACCCAGAACAATAAAAATACCAAAGTAAACGTACAGAAAGAGATATTGAATGAGAAAAAGAAGAACAAGAACAAGGAAATGGAGAGAAACGGGCCACCTGACAATGATTGCTGTTCAATATGCCATGGCAACTTCAACGTTCCTTGCCAGGCTAACTGCTCTCACTGGTTTTGTGGGCAATGTATTTTACAAGTTTGGGAACACGGATCAGCTTTGCAACCATGCAGATGTCCTTTGTGCCGTAACCCCATTAATTTGCTGATACCTACTGAGGCTTCATCACAGCAACGCAGCAATCCGGAGGTTGCAAATATAATTGGCAAGTTGGAATCATATAACCGTTTATTTGGTGAACGTTCCAGTGGTCTGATCCAGCGATTGAGAGACCTTCCCTTTCTTCTGCGGAGGCTGGTGCATGATCTACTGGATCCACAGAGGTCTCTTCCTGTTGTTATCAAGGCTCGTGTCTATTTGGCAGTGTTCCTAAGTGCCATATATCTATTAAGCCCCGTGGACATCATTCCAGAAGGAATTCTAGGAATAATTGGCCTCGTGGATGATATGATTATATTGCTTATTTGCTTCCTACACGTGGCTGCCATTTATCGATCCGTTCTTGTTTTCCGTCATGGAGGTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185307.p1 GENE.S_Transcript_185307~~S_Transcript_185307.p1 ORF type:5prime_partial len:232 (-),score=21.70,DUF1232|PF06803.8|4.3e-08 S_Transcript_185307:160-855(-)
PHSRRNTPEAETARKFRHTQNNKNTKVNVQKEILNEKKKNKNKEMERNGPPDNDCCSICHGNFNVPCQANCSHWFCGQCILQVWEHGSALQPCRCPLCRNPINLLIPTEASSQQRSNPEVANIIGKLESYNRLFGERSSGLIQRLRDLPFLLRRLVHDLLDPQRSLPVVIKARVYLAVFLSAIYLLSPVDIIPEGILGIIGLVDDMIILLICFLHVAAIYRSVLVFRHGGS*

Click here to download the sequence:
Link to NCBI Protein BLAST