Transcript Information: S_Transcript_185446.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value2.4E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5540438677478
Replicate 23.5429297099659
Replicate 31.6827313944891
Condition 2: 8 Hour
Replicate 11.1674483750255
Replicate 21.3880344046546
Replicate 31.8670815420422
Condition 3: 24 Hour
Replicate 11.8336945995754
Replicate 21.6542928157918
Replicate 32.1171789099185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185446.p1 GENE.S_Transcript_185446~~S_Transcript_185446.p1 ORF type:complete len:274 (-),score=37.71,HMG-CoA_red|PF00368.14|1.2e-12 S_Transcript_185446:27-848(-)
ATGACGGAAGTTCGCCGGCGACGAGGTGCTAATACAAAAGCAAGGAGTTGGCATGGTGATGATCTAAAGGCATCAGACGCTCTGCCTTTACCCCTCTACTTAACCAACACAGTCTTCTTTACTCTCTTCTTCTCTGTAGCTTATTACCTTCTTCAACGTTGGCGTGACAAGATCCGTCACTCTGTTCCTCTCCACGTCGTCACTTTCCCTGAACTTGCTGCCATCATCACTCTCATCGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTCCAGTCCTTCATTTCCCCCCGCTCCTCCACCGGTGTCTGGACCGACGACGAGGAAGAGGAAGAGGTGGCCGAGGCCGACAAGCGCCCTCCCTGCGGTATTGTCCCACCACCACCTGTCATCTCAACTCAAAAGGATAAAGATAGAGATGGCCTCAAAGCAACACATACATCAAAAACCCTAGATGGGGAAGACGAGGAAATTGCACAATCTGTTGTGGAGGGATCAGTCCCCTCTTACTCCCTCGAATCGAGGCTCGGGGACTGCTTCCGAGCGGCTAAGATTCGAAGGGAGGCACTCCAGAGGATAACAGGAAGGTCAATATCTGGACTGCCATTGGATGGGTTTGATTATGAATCCATATTGGGGCAATGCTGCGAAATGCCCGTTGGGTATGTGCAGATCCCGGTGGGTATTGCTGGCCCATTGTTGCTTGATGGGAGAGAGTATTCAGTCCCTATACTGGTGACGATGGCAGTGAGGATGGCGGAGTTGAACGCCGGTTTGGGCGGCGGTGTCGCCGACGAAGTCAAATCGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185446.p1 GENE.S_Transcript_185446~~S_Transcript_185446.p1 ORF type:complete len:274 (-),score=37.71,HMG-CoA_red|PF00368.14|1.2e-12 S_Transcript_185446:27-848(-)
MTEVRRRRGANTKARSWHGDDLKASDALPLPLYLTNTVFFTLFFSVAYYLLQRWRDKIRHSVPLHVVTFPELAAIITLIASFIYLLGFFGIDFVQSFISPRSSTGVWTDDEEEEEVAEADKRPPCGIVPPPPVISTQKDKDRDGLKATHTSKTLDGEDEEIAQSVVEGSVPSYSLESRLGDCFRAAKIRREALQRITGRSISGLPLDGFDYESILGQCCEMPVGYVQIPVGIAGPLLLDGREYSVPILVTMAVRMAELNAGLGGGVADEVKSR*

Click here to download the sequence:
Link to NCBI Protein BLAST