Transcript Information: S_Transcript_185447.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value9E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.642391751877
Replicate 212.917923161212
Replicate 39.1946394387806
Condition 2: 8 Hour
Replicate 13.4615126311868
Replicate 24.1501400375145
Replicate 32.9656831450409
Condition 3: 24 Hour
Replicate 17.4715833388119
Replicate 28.3429103483946
Replicate 38.3342407599514


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185447.p1 GENE.S_Transcript_185447~~S_Transcript_185447.p1 ORF type:3prime_partial len:345 (-),score=63.46,HMG-CoA_red|PF00368.14|3.1e-51 S_Transcript_185447:1-1032(-)
ATGACGGAAGTTCGCCGGCGACGAGAAGCAAGGAGTTGCCATGGTGATGATTTAAAGGCATCAGACGCTCTGCCTTTACCCCTCTACTTAACCAACACAGTCTTCTTTACTCTCTTCTTCTCTGTAGCTTATTACCTTCTTCAACGTTGGCGTGACAAGATCCGTCACTCTGTTCCTCTCCACGTCGTCACTTTCCCTGAACTTGCTGCCATCATCACTCTCATCGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGATTTCGTCCAGTCCTTCATTTCCCCCCGCTCCTCCACCGGTGTCTGGACCGACGACGAGGAAGAGGAAGAGGTGGCCGAGGCCGACAAGCGCCCTCCCTGCGGTATTGTCCCACCAGCACCTGTCATCTCAACTCAAAATGATAAAGATAGAGATGACCTCAAAACAACACATACATCAAAAACCCTAGATGGGGAAGACGAGGAAATTGCACAATCTGTTGTGGAGGGATCAGTCCCCTCTTACTCCCTCGAATCGAGGCTCGGGGACTGCTTCCGAGCGGCTAAGATTCGAAGGGAGGCACTCCAGAGGATAACAGGAAGGTCAATATCTGGACTGCCATTGGATGGGTTTGATTATGAATCGATATTGGGGCAATGCTGCGAATTGCCCGTCGGGTATGTGCAGATCCCGGTGGGTATTGCTGGCCCATTGTTGCTTGATGGGAGAGAGTATTCAGTCCCAATGGCCACCACTGAGGGTTGTTTGGTTGCGAGTACAAACCGGGGTTGTAAAGCTATTTACCTTTCTGGAGGTGCTAGTAGTGTCATTTTGAAGGATAGGATGACTAGAGCCCCTGTTGTTAGGTTTGGCTCTGCTAGAAGAGCTGCTGAATTGAAGTTCTTCCTTGAGGATCCTGCTAATTTTGACACAATCTCTCTTGTTTTCAATAAGTCTAGCAGGTTTGGTAGGTTGCAGGAGGTCAAGTGTGCAATTGCTGGGAAGAATTTGTATGTCAGGTTTGCCTGCAGTACTGGAGATGCAATGGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185447.p1 GENE.S_Transcript_185447~~S_Transcript_185447.p1 ORF type:3prime_partial len:345 (-),score=63.46,HMG-CoA_red|PF00368.14|3.1e-51 S_Transcript_185447:1-1032(-)
MTEVRRRREARSCHGDDLKASDALPLPLYLTNTVFFTLFFSVAYYLLQRWRDKIRHSVPLHVVTFPELAAIITLIASFIYLLGFFGIDFVQSFISPRSSTGVWTDDEEEEEVAEADKRPPCGIVPPAPVISTQNDKDRDDLKTTHTSKTLDGEDEEIAQSVVEGSVPSYSLESRLGDCFRAAKIRREALQRITGRSISGLPLDGFDYESILGQCCELPVGYVQIPVGIAGPLLLDGREYSVPMATTEGCLVASTNRGCKAIYLSGGASSVILKDRMTRAPVVRFGSARRAAELKFFLEDPANFDTISLVFNKSSRFGRLQEVKCAIAGKNLYVRFACSTGDAMG

Click here to download the sequence:
Link to NCBI Protein BLAST