Transcript Information: S_Transcript_185452.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value4.8E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.390007331543
Replicate 26.9512898605869
Replicate 37.4528864995372
Condition 2: 8 Hour
Replicate 12.3370290758502
Replicate 21.5323183999813
Replicate 31.3139906057865
Condition 3: 24 Hour
Replicate 14.0398072208633
Replicate 26.0540318594353
Replicate 37.7739177960974


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185452.p1 GENE.S_Transcript_185452~~S_Transcript_185452.p1 ORF type:3prime_partial len:146 (-),score=42.44,HMG-CoA_red|PF00368.14|1.4e-55 S_Transcript_185452:1-405(-)
ATGGGGATGAACATGGTTTCTAAAGGTGTTCAGAATGTCTTGGAATTTCTTCAGAGTGATTTCCCTGACATGGATGTCATTGGAATTTCTGGGAACTACTGTTCGGACAAGAAGCCAGCAGCAGTGAACTGGATAGAAGGAAGAGGGAAATCTGTGGTATGTGAGGCAGTAATCAAGGAAGAAGTGGTGAATAAAGTGTTGAAAACCAATGTGGGTGCCCTGGTAGAGCTGAATATGCTGAAGAACCTTGCTGGTTCAGCTGTTGCTGGAGCACTTGGTGGTTTTAACGCCCATGCCAGCAACATAGTGTCGGCAATTTTCATAGCCACTGGACAGGATCCTGCACAGAATGTGGAGAGTTGCCACTGCATCACCATGATGGAACCTGTAAATGATGGCCGACCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185452.p1 GENE.S_Transcript_185452~~S_Transcript_185452.p1 ORF type:3prime_partial len:146 (-),score=42.44,HMG-CoA_red|PF00368.14|1.4e-55 S_Transcript_185452:1-405(-)
MGMNMVSKGVQNVLEFLQSDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEAVIKEEVVNKVLKTNVGALVELNMLKNLAGSAVAGALGGFNAHASNIVSAIFIATGQDPAQNVESCHCITMMEPVNDGRP

Click here to download the sequence:
Link to NCBI Protein BLAST