Transcript Information: S_Transcript_185948.p1


Annotated TAIR IDAT3G22220.1
Annotated Gene NamehAT transposon superfamily
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7839808-7842358 | Reverse length=761
E-Value1.1E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2580912459583
Replicate 28.3953212212362
Replicate 39.1255616205868
Condition 2: 8 Hour
Replicate 110.191874852864
Replicate 28.8615764092424
Replicate 39.5506070437903
Condition 3: 24 Hour
Replicate 110.46852208835
Replicate 26.3282071284606
Replicate 36.5511803649652


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_185948.p1 GENE.S_Transcript_185948~~S_Transcript_185948.p1 ORF type:complete len:770 (+),score=163.11,DUF659|PF04937.11|3.2e-49,zf-BED|PF02892.11|4.8e-08,Dimer_Tnp_hAT|PF05699.10|3.6e-06 S_Transcript_185948:315-2624(+)
ATGGGTTCAGGGTTTGAGCCAGTGCCAGTAAGCTCACAAAAGCATGACCCAGCTTGGAAGCATTGTCATATGTACAAGGATGGGGATAGAGTTCAGCTTAAATGTGTATACTGTTATAAAATCTTTAGGGGAGGTGGAATTCATAGGATTAAAGAACACTTAGCTTGTCAAAAGGGTAATGCATCTACTTGCCACCGGGTCCCACCTGAAGTCAGGCAAGCTATGCAACAGAGTTTAGATGGTGTTGTTGTCAAGAAGAGGAGGAAGCAAAAGGTTGTTGATGACCTTCATCATCATCCCATTAATAGTATTATCCCGGCATCTGATGATGCTGATCTTGATGCCTTTGCCAATGAGTGTAATGTTAATACTGAGGTTCAGATGATTACGAATCCTAATGCCCTTGAGCCCAACTCGACGTTGATGTCTCCTAGAGAGAGTGGTGGGATGAGTGTTAGAGTCCCCGAGAAGAGGAAACGTGGGAGGCCCCCTAAGAATGCTTTGGCTTCCCATGCTGGTAATGGCGACATAGTTCCTGTTAGTGATGATGGTCGTGGTGTTAATGGGATGGATGTCTCGGTGAAGAAGGTGAACTCTCCAGTTCATTTGGCGATAGGACGGTTTTTGTATGATATTGGGGTTCCTCTAGAGGCAGTAAACTCAGTTTACTTTCAGCCGATGATTGATGCTATTGCTTCGGAAGGACCAGGACTTCTGGGGCCTTCACACCATGATCTTCGAGGATGGATTCTGAAAAGTGCAGTTGATGAGGTGAAGGCTGATATGGACTATTGCCAAAGGGCTTGGGGACGAACTGGCTGTTCTATTTTGGTGGAGGAATATAGTACAGGGAAGGGCATGATGTTTCTCAACTTTTTCGTTTACTGTCCTGAAGGGACTATGTTCTTGAAGTCTGAAGATGTTACCAACATAATGGATTCTGTTGAAGGTGTCTTTGAATTGCTCAAGCAAGTTGTTGAAGAAGTTGGAGTAAAAAATGTCTTGCAGGTAATCACACCCAATACAGAGTGCTATGCTGCCGCAGGGAAAAGGCTATCTGACACTCATCCTATGTTATACTGGGCGCCTTGTGCAGCTAGTTCTGTTATTTTGATGCTTGAGGACTTTGGCAAATTTGAATGGATAAATTCTGCTCTAGAGCAATGCAAGTCTATAACAAGGTTTATCTATAATCACAGTGTTGTCTTGAATATGACGCGGAGGTATACTTGTGGCATGGATCTGGTGGTACCTGATGTAAGTCCATCAGTCACAAATTTCAGAACAGTCAAACGCATGATCGATCTTAAACAGGGTTTGGAGAACCTAGTTCACTCACAGGAGTGGCTGGACTCCTATTATTCTAAACGAGAAGGGGCGTTGTCTATGTTTGATCTTATCCGTGACCCTTCCTTTTGGTCCTCATGCAACATGGTTATCCAGCTAACTGATCCACTTTTGCGTGCTTTGAACATTGTTAGCAGTGACAAGAGACCTGCAATGGGATACATATATGGAGCAATTTACCGAGCCAAAGAAACACTAAAAAGGGAACTTAGAAAGAGGGAAGACTATTTGCCTTACTGGAATATCATTGATCAGAGGTGGGAACAACATCAACAGCTTCCCCTTTATGCTGCGGGCTTCTATCTCAACCCAAAGTTCTTTTACAGCATTGAAGGAGATTTGCCTGGTGCAATTGTCTCAGGAATGTTTGACTGTATAGAGAGATTAGTTCCTGATACCAAAATCCAGGATAAAATCAGCAAAGAACTCAATTCATACAAAGTTGCTGCTGGAGATTTTGGGCGGAAGATGGCAATCAGAGCAAGAGAGAGCCTTCTACCTTCTGAATGGTGGTCTACATACGGAGGTGCCTGCCCAAATCTTTCGCGTTTTGCAGTCCGTATCCTTGGTCAATGTTGCAGTCTAATGCAGTGTAAACGAGATCTTATCCCATTTGAGCAAATGCACAACACTATGAATAGTTTGGAGCATCAACGACTCAGTGATCAGGTCTTCACTCAGTATAACTTACGGCTGAGGGAAATGGCTCAGAAGACCAGGGAGCATGATAATATGGACCCTCTCTCAGTTGACAATCATGATAGTGTTGCTGATTGGATTGCGAAGAAAGAATTTTGCTTGGATGACCATGGAAGCTTTGACTGGACAGCAATTGAGCTGCCTTCATTGAGCAAGATGCTTGTGAAATGCTCTGTTCACGTAGTTGAGGAACTGGGTGGTGGCTTTAATGATTATGATATTCTCGGTGAAGTGAAGGATGATGAAGATGCACTTGCAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_185948.p1 GENE.S_Transcript_185948~~S_Transcript_185948.p1 ORF type:complete len:770 (+),score=163.11,DUF659|PF04937.11|3.2e-49,zf-BED|PF02892.11|4.8e-08,Dimer_Tnp_hAT|PF05699.10|3.6e-06 S_Transcript_185948:315-2624(+)
MGSGFEPVPVSSQKHDPAWKHCHMYKDGDRVQLKCVYCYKIFRGGGIHRIKEHLACQKGNASTCHRVPPEVRQAMQQSLDGVVVKKRRKQKVVDDLHHHPINSIIPASDDADLDAFANECNVNTEVQMITNPNALEPNSTLMSPRESGGMSVRVPEKRKRGRPPKNALASHAGNGDIVPVSDDGRGVNGMDVSVKKVNSPVHLAIGRFLYDIGVPLEAVNSVYFQPMIDAIASEGPGLLGPSHHDLRGWILKSAVDEVKADMDYCQRAWGRTGCSILVEEYSTGKGMMFLNFFVYCPEGTMFLKSEDVTNIMDSVEGVFELLKQVVEEVGVKNVLQVITPNTECYAAAGKRLSDTHPMLYWAPCAASSVILMLEDFGKFEWINSALEQCKSITRFIYNHSVVLNMTRRYTCGMDLVVPDVSPSVTNFRTVKRMIDLKQGLENLVHSQEWLDSYYSKREGALSMFDLIRDPSFWSSCNMVIQLTDPLLRALNIVSSDKRPAMGYIYGAIYRAKETLKRELRKREDYLPYWNIIDQRWEQHQQLPLYAAGFYLNPKFFYSIEGDLPGAIVSGMFDCIERLVPDTKIQDKISKELNSYKVAAGDFGRKMAIRARESLLPSEWWSTYGGACPNLSRFAVRILGQCCSLMQCKRDLIPFEQMHNTMNSLEHQRLSDQVFTQYNLRLREMAQKTREHDNMDPLSVDNHDSVADWIAKKEFCLDDHGSFDWTAIELPSLSKMLVKCSVHVVEELGGGFNDYDILGEVKDDEDALAD*

Click here to download the sequence:
Link to NCBI Protein BLAST