Transcript Information: S_Transcript_186369.p1


Annotated TAIR IDAT5G52850.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21414935-21417616 | Reverse length=893
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.82308251242826
Replicate 21.3647086324236
Replicate 31.1407877989856
Condition 2: 8 Hour
Replicate 10.87939753885085
Replicate 21.1531880742127
Replicate 31.7580080498954
Condition 3: 24 Hour
Replicate 11.5764348910738
Replicate 20.7009426260726
Replicate 30.78006322902421


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186369.p1 GENE.S_Transcript_186369~~S_Transcript_186369.p1 ORF type:3prime_partial len:97 (-),score=13.25,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|0.0017,PPR|PF01535.16|0.0014,PPR|PF01535.16|32 S_Transcript_186369:3-290(-)
ATGTTTATATCCCACAAATCTAGGGTTGGGGTTCACTGTTCAGTTAATTTATGTAATGTTATGATGAATATGTACTCTAAGTGTGGGTCTGAGTTTGATGCCCGGAAGGTGTTCGATGAAATTCCTAAACCAGATGTTGTTTCTTGGACTGCTCGGATTGGGGTGGCTTGTGATGGTACTGAAGCTTTAAAGGCTTTTAGATTTATGCACTCGAATGGTTTGGAAGTGAATGAACTTACTATAATAAATGTATTGTCTGCGATTGAGGACCCTAAGCTGTTGTTACCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186369.p1 GENE.S_Transcript_186369~~S_Transcript_186369.p1 ORF type:3prime_partial len:97 (-),score=13.25,PPR_2|PF13041.2|0.17,PPR_2|PF13041.2|0.0017,PPR|PF01535.16|0.0014,PPR|PF01535.16|32 S_Transcript_186369:3-290(-)
MFISHKSRVGVHCSVNLCNVMMNMYSKCGSEFDARKVFDEIPKPDVVSWTARIGVACDGTEALKAFRFMHSNGLEVNELTIINVLSAIEDPKLLLP

Click here to download the sequence:
Link to NCBI Protein BLAST