Transcript Information: S_Transcript_186371.p1


Annotated TAIR IDAT4G18750.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)DOT4
Annotation TypeHomolog
Chromosome Positionchr4:10304850-10307465 | Forward length=871
E-Value6E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.9564047318893
Replicate 20.31025797815255
Replicate 30.43225162695939
Condition 2: 8 Hour
Replicate 11.8659716527491
Replicate 22.0973608099744
Replicate 32.298114819912
Condition 3: 24 Hour
Replicate 10.34132630454053
Replicate 20.56659528940868
Replicate 30.74877944327688


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186371.p1 GENE.S_Transcript_186371~~S_Transcript_186371.p1 ORF type:5prime_partial len:640 (+),score=128.11,PPR_2|PF13041.2|2.3e-05,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|5.8e-08,PPR_2|PF13041.2|75,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|3.7e+03,PPR_2|PF13041.2|3.2e-10,PPR_2|PF13041.2|3.9e+02,PPR_2|PF13041.2|7.6,PPR_2|PF13041.2|39,PPR|PF01535.16|5.4e-06,PPR|PF01535.16|0.044,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|0.0055,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.32,PPR|PF01535.16|6.7e+03,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|8.8,PPR|PF01535.16|0.17,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.39,PPR_3|PF13812.2|4.2e+02,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|60,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.88,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|1.7e+03 S_Transcript_186371:1-1920(+)
GCTGAGAAGTGTTTTGAGGAGTGTTTGGATTTGGATAGTGTTGTATGGACTGCTATGATTAATGGGTATGTTTGGAACGGTGAGTTTGAGAAGGGTAGAGAGGTTTTTGTTGGAATGAGAGGGTTGGGGTTGGAATTGAATGAGTTCAGTTTGACTGCTGTCAGTGGGGCATTGAGAGAGGTTAGAGAAGGTCAGCAAATTCATGGGTTCGGTCTTAAGGTTGGATTATTATGTGGGGGTTCTATTCATTTGTGTAATGTTCTGATGAATATGTACTCTAAGTGTGGGTCTGAGTTTGATGCCCGGAAGGTGTTCGATGAAATTCCTAAACCAGATGTTGTTTCTTGGACTGCTCGGATTGGGGTGGCTTGTGATGGTAGTGAAGCTTTAAAGGCATTTAGATTTATGCACTCGAATGGTTTGGAGGTGAATGAACTTACTATAATAAATATATTGTCTGCGATTGAGGACCCTAAGCTGTTGTTACCTGGGAGACAAGTTCATTCACTTTGCCACAAGGAGGGTTATTTAACAGTTATGTCCGTCAGTAATGCTCTTATTACCATGTATGGGAAGTTTAGTGAGATGGATGATGCTAGGCTTGTGTTTGATGAAATGGCTTCTCATGATTTGATATCTTGGAATTCTTTGATTGGAGGGTACTCTGAAAATGGGCTATTGAGTTTAGTGCTTAGTCTATTTTCTGAAATGTGTGGTCTTGGTATTCAGCCTGACCAGTACACCCTTGCCAGTGTTCTTGGCACAGCTTCAGGTCCCAGCTTTTGTGATATTGTGATGCAATTCCATACGCTCATGATTAAGACTGGCTTGGCATCAGATGATTCAATGCTATCTTGTTTGATTTCGTCGTATGGTAAATGTCATAACTTAGACTATGCAAAGAAGGTATTATCTGCAATAAAAGAGAAAAATGAAGGGCATCTGCAAGTCATGGCAGCCACTGCGATTGCTGCAGGATACCCTGCTGATGCTCTGGAATGTTGCAAATCTGCGGTGAGCTTGTGGTCTAAAATAGACGGTGTTACGTTGAGCATCATGCTCAAAGCTTGTAGTGGTTTAACCAATCTCGGACAGGGAAAAGCTATCCATAGTTTGGCTCTGAAATCTGGACTTGATAGTGATAAGTTTGTCGAGAGTGCTGTTGTCGATTTTTATTGCAAATGTGGAAGCATTATTGATGCACACAAGGAGTTTTTGCATATATCAAGCGATAATTTGGCTGCTTGGAATGCTATGATTATGGGATATGCTCAACATGGATGTTATGGTGAAGTCGTTGACCTGTTTGACAAGATGAACGAATTGGGTGTTAAGCCCGACGAGATAACATACCTTGGGATTCTCCAACTTTGTTGTCATGTTGGACTCGTGAAAGAAGCTAAGATTCATTTGAGTTCCATGTTCGAGCTTCATGGAGTGGTTCCATGTCTCGAACACTATGCTTCGATGGTCGACTTGCTAGGCCGAGTTGGGCTTGTGAAGGAAGCAAAGCTCCTCATTGATCAGATGCCTGTTAACCCTGATGCTCAAGTTTGGCAAAGTCTCCTGTCAGCCTGCCACAATATAGGTGATCTGGAAGTTGGAAAAGTTGCAGCTGACGAACTTCTTAGGTTACAGCCTCAAAATGACTCTGCCTACATTCTTCTGTCAAATATTTATGCTAGAACAGGCAATTGGGATGCTGTAAGAAGACTTAGAAAGGAAATGAAGGATAAATTGATATACAAGGAACCAGGGTCTAGTTGGACTGAAGTTGGAGGTTTGGTTTATCACTTCCTGGCGGAAGACACTTCTCATCCTGAGAAAGAAAAGATATATTTTTATTTACAAAGTCTGGCTCAGCAAATGTTCCCCGTATCCGAAGAAGAAGAAGAAGATTCTTGTGTCGATGGTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186371.p1 GENE.S_Transcript_186371~~S_Transcript_186371.p1 ORF type:5prime_partial len:640 (+),score=128.11,PPR_2|PF13041.2|2.3e-05,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|0.35,PPR_2|PF13041.2|5.8e-08,PPR_2|PF13041.2|75,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|3.7e+03,PPR_2|PF13041.2|3.2e-10,PPR_2|PF13041.2|3.9e+02,PPR_2|PF13041.2|7.6,PPR_2|PF13041.2|39,PPR|PF01535.16|5.4e-06,PPR|PF01535.16|0.044,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|0.0055,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|0.32,PPR|PF01535.16|6.7e+03,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|8.2e-08,PPR|PF01535.16|8.8,PPR|PF01535.16|0.17,PPR|PF01535.16|4.9e+03,PPR|PF01535.16|0.39,PPR_3|PF13812.2|4.2e+02,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|2.7e+03,PPR_3|PF13812.2|0.095,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|60,PPR_3|PF13812.2|9e+03,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|2.7e+02,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|12,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.88,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|0.061,PPR_1|PF12854.3|1.1e+04,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|1.2e+02,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|1.7e+03 S_Transcript_186371:1-1920(+)
AEKCFEECLDLDSVVWTAMINGYVWNGEFEKGREVFVGMRGLGLELNEFSLTAVSGALREVREGQQIHGFGLKVGLLCGGSIHLCNVLMNMYSKCGSEFDARKVFDEIPKPDVVSWTARIGVACDGSEALKAFRFMHSNGLEVNELTIINILSAIEDPKLLLPGRQVHSLCHKEGYLTVMSVSNALITMYGKFSEMDDARLVFDEMASHDLISWNSLIGGYSENGLLSLVLSLFSEMCGLGIQPDQYTLASVLGTASGPSFCDIVMQFHTLMIKTGLASDDSMLSCLISSYGKCHNLDYAKKVLSAIKEKNEGHLQVMAATAIAAGYPADALECCKSAVSLWSKIDGVTLSIMLKACSGLTNLGQGKAIHSLALKSGLDSDKFVESAVVDFYCKCGSIIDAHKEFLHISSDNLAAWNAMIMGYAQHGCYGEVVDLFDKMNELGVKPDEITYLGILQLCCHVGLVKEAKIHLSSMFELHGVVPCLEHYASMVDLLGRVGLVKEAKLLIDQMPVNPDAQVWQSLLSACHNIGDLEVGKVAADELLRLQPQNDSAYILLSNIYARTGNWDAVRRLRKEMKDKLIYKEPGSSWTEVGGLVYHFLAEDTSHPEKEKIYFYLQSLAQQMFPVSEEEEEDSCVDGL*

Click here to download the sequence:
Link to NCBI Protein BLAST