Transcript Information: S_Transcript_186374.p1


Annotated TAIR IDAT1G50270.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18622044-18623834 | Forward length=596
E-Value3E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20.50142703539806
Replicate 30.4191530928091
Condition 2: 8 Hour
Replicate 11.4540038852591
Replicate 20
Replicate 30.96890216386279
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186374.p1 GENE.S_Transcript_186374~~S_Transcript_186374.p1 ORF type:5prime_partial len:88 (+),score=21.24,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|2.6e-07,PPR_2|PF13041.2|7.5e-07 S_Transcript_186374:1-264(+)
GCTGAGAAGTGTTTTGAGGAGTGTTTGGATTTGGATAGTGTTGTATGGACTGCTATGATTAATGGGTATGTTTGGAACGGTGAGTTTGAGAAGGGTAGAGAGGTTTTTGTTGGAATGAGAGGGTTGGGGTTGGAATTGAATGAGTTCAGTTTGACTGCTGTCAGTGGGGCATTGAGAGAGGTTAGAGAAGGTCAGCAAATTCATGGGTTCGGTCTTAAGGTTGGTTATTATGCGGAAGTTCAGTTCATTTGTGTTATGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186374.p1 GENE.S_Transcript_186374~~S_Transcript_186374.p1 ORF type:5prime_partial len:88 (+),score=21.24,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|2.6e-07,PPR_2|PF13041.2|7.5e-07 S_Transcript_186374:1-264(+)
AEKCFEECLDLDSVVWTAMINGYVWNGEFEKGREVFVGMRGLGLELNEFSLTAVSGALREVREGQQIHGFGLKVGYYAEVQFICVML*

Click here to download the sequence:
Link to NCBI Protein BLAST