Transcript Information: S_Transcript_186585.p1


Annotated TAIR IDAT3G10420.2
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SPD1
Annotation TypeOrtholog
Chromosome Positionchr3:3239307-3242274 | Forward length=684
E-Value2.5E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9032364983833
Replicate 24.3122725044234
Replicate 36.8741107220693
Condition 2: 8 Hour
Replicate 17.9485545727496
Replicate 27.931837244994
Replicate 38.4294488256063
Condition 3: 24 Hour
Replicate 18.2414787714514
Replicate 211.537940438868
Replicate 311.005983013142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186585.p1 GENE.S_Transcript_186585~~S_Transcript_186585.p1 ORF type:5prime_partial len:220 (-),score=42.16,AAA_18|PF13238.2|2.9e-08,AAA_22|PF13401.2|4.3e-07,NTPase_1|PF03266.11|0.0007,NTPase_1|PF03266.11|0.4,AAA|PF00004.25|5.9e-07,AAA_16|PF13191.2|5.3e-07,AAA_17|PF13207.2|1.9e-06,AAA_19|PF13245.2|3e-06,AAA_5|PF07728.10|4.2e-05,AAA_5|PF07728.10|5e+02,AAA_10|PF12846.3|9.2e-06,AAA_25|PF13481.2|3.9e-05 S_Transcript_186585:258-917(-)
AAAATCAGATTGAATTTTATATTGGTTAGTTGTATTGTTCAGGTGGGTGATTTTTCAGATGATAACCGATCTGGTATCGATCGTTCACTGCATCGTATAAGTGCCATTCGGAATCGTAAGATGCAAATAATTGGACTTACTTGTCGGGTGGGTAGAGCTGTTTCCGGGAGTGCAGAAATCATACATGATTTGGTTGAGGGCGGAGGATCTATTTTGGTTATAGGACCCCCTGGAGTTGGCAAAACAACCTTGATCAGAGAGATTGCCAGAATGCTGGCAGATGAGCACAACAAACGCGTGGTCATTGTGGACACATCAAATGAGATTGGGGGTGATGGAGATGTTCCACATTCAGGTATAGGCCGTGCAAGAAGGATGCAGGTTCCAAATGTCAATATGCAGCATAATGTGATGATTGAAGCTGTTGAAAATCACATGCCTGAGACCATCATAATCGATGAGATCGGAACAGAACTTGAAGCTTTGGCTGCCAGCACCATTGCTCAAAGGGGAGTGCAACTTGTTGGGACTGCTCATGGCATGACTATAGAAAACATAATTAAGAATCCCTCTCTGCAACTTCTTGTTGGTGGCATAGATTTGGGGGCCAAAATACCGTTGCCTGCATTGTTCTTGAATATTATTTTGGACCAAAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186585.p1 GENE.S_Transcript_186585~~S_Transcript_186585.p1 ORF type:5prime_partial len:220 (-),score=42.16,AAA_18|PF13238.2|2.9e-08,AAA_22|PF13401.2|4.3e-07,NTPase_1|PF03266.11|0.0007,NTPase_1|PF03266.11|0.4,AAA|PF00004.25|5.9e-07,AAA_16|PF13191.2|5.3e-07,AAA_17|PF13207.2|1.9e-06,AAA_19|PF13245.2|3e-06,AAA_5|PF07728.10|4.2e-05,AAA_5|PF07728.10|5e+02,AAA_10|PF12846.3|9.2e-06,AAA_25|PF13481.2|3.9e-05 S_Transcript_186585:258-917(-)
KIRLNFILVSCIVQVGDFSDDNRSGIDRSLHRISAIRNRKMQIIGLTCRVGRAVSGSAEIIHDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHNKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPSLQLLVGGIDLGAKIPLPALFLNIILDQS*

Click here to download the sequence:
Link to NCBI Protein BLAST