Transcript Information: S_Transcript_186586.p1


Annotated TAIR IDAT3G10420.2
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)SPD1
Annotation TypeOrtholog
Chromosome Positionchr3:3239307-3242274 | Forward length=684
E-Value8.6E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.498530987476
Replicate 214.330171995556
Replicate 316.960201028649
Condition 2: 8 Hour
Replicate 110.765550738874
Replicate 27.69706689534
Replicate 39.1157804870177
Condition 3: 24 Hour
Replicate 127.604627690686
Replicate 218.36424603614
Replicate 323.032349231682


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186586.p1 GENE.S_Transcript_186586~~S_Transcript_186586.p1 ORF type:internal len:311 (-),score=76.96,AAA_18|PF13238.2|5.9e-08,AAA_22|PF13401.2|8e-07,NTPase_1|PF03266.11|0.0011,NTPase_1|PF03266.11|0.59,AAA_16|PF13191.2|7.3e-07,AAA|PF00004.25|1.2e-06,AAA|PF00004.25|4.9e+03,AAA_17|PF13207.2|2.8e-06,AAA_19|PF13245.2|5.5e-06 S_Transcript_186586:2-931(-)
AAAATCAGATTGAATTTTATATTGGTTAGTTGTATTGTTCAGGTGGGTGATTTTTCAGATGATAACCGATCTGGTATCGATCGTTCACTGCATCGTATAAGTGCCATTCGGAATCGTAAGATGCAAATAATTGGACTTACTTGTCGGGTGGGTAGAGCTGTTTCCGGGAGTGCAGAAATCATACATGATTTGGTTGAGGGCGGAGGATCTATTTTGGTTATAGGACCCCCTGGAGTTGGCAAAACAACCTTGATCAGAGAGATTGCCAGAATGCTGGCAGATGAGCACAACAAACGCGTGGTCATTGTGGACACATCAAATGAGATTGGGGGTGATGGAGATGTTCCACATTCAGGTATAGGCCGTGCAAGAAGGATGCAGGTTCCAAATGTCAATATGCAGCATAATGTGATGATTGAAGCTGTTGAAAATCACATGCCTGAGACCATCATAATCGATGAGATCGGAACAGAACTTGAAGCTTTGGCTGCCAGCACCATTGCTCAAAGGGGAGTGCAACTTGTTGGGACTGCTCATGGCATGACTATAGAAAACATAATTAAGAATCCCTCTCTGCAACTTCTTGTTGGTGGCATAGAGAGTGTTACCCTGGGTGATGAAGAAGCGAGACGAAGAAAGGTGCAGAAGACAGTGCTTGAGAGGAAAGGTCCTCCGACATTTACATGTGCTGTTGAAATGATATCTAAAACTGAATGTCGTGTCCATCACAGATTGGATGCAACAGTTGATGCAATTCTTGCAGGAAAATCTCCTCTTTTTGAGATCCGTCACATGGATCCTGATGCCAAAAGCTCTGCGAAATCAAGTGAGACCCCTGAACAGCAGCAGCTACTACAAGTATCTGAGTTCATTAAAAATGAAAACAGAATTGCCCAAATTGAATCTGAGGATGAAGATGCAGATATTAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186586.p1 GENE.S_Transcript_186586~~S_Transcript_186586.p1 ORF type:internal len:311 (-),score=76.96,AAA_18|PF13238.2|5.9e-08,AAA_22|PF13401.2|8e-07,NTPase_1|PF03266.11|0.0011,NTPase_1|PF03266.11|0.59,AAA_16|PF13191.2|7.3e-07,AAA|PF00004.25|1.2e-06,AAA|PF00004.25|4.9e+03,AAA_17|PF13207.2|2.8e-06,AAA_19|PF13245.2|5.5e-06 S_Transcript_186586:2-931(-)
KIRLNFILVSCIVQVGDFSDDNRSGIDRSLHRISAIRNRKMQIIGLTCRVGRAVSGSAEIIHDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHNKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPSLQLLVGGIESVTLGDEEARRRKVQKTVLERKGPPTFTCAVEMISKTECRVHHRLDATVDAILAGKSPLFEIRHMDPDAKSSAKSSETPEQQQLLQVSEFIKNENRIAQIESEDEDADIS

Click here to download the sequence:
Link to NCBI Protein BLAST