Transcript Information: S_Transcript_186639.p1


Annotated TAIR IDAT2G16940.2
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7342869-7347052 | Reverse length=610
E-Value7E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97762045353724
Replicate 20.99057422503128
Replicate 32.1830177405078
Condition 2: 8 Hour
Replicate 11.7408481891537
Replicate 21.461018686676
Replicate 31.566062273019
Condition 3: 24 Hour
Replicate 11.9615813746656
Replicate 23.0526766613039
Replicate 34.0149376808144


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186639.p1 GENE.S_Transcript_186639~~S_Transcript_186639.p1 ORF type:complete len:245 (-),score=55.45 S_Transcript_186639:243-977(-)
ATGGATTTTGATGAGTATGAATACTTGGAAAAGACTGTTGAAAATCCCGAGCCCCAGAAATCGAAGGAAGATGCCAATTGTGGGGATGCACCTCTCAAATCAGGGGAAAAGGATAGAAGCCGAAGTTCTTGGCATAGGGGTGAGGATGATGATGTCAATCGAAAACCCAAGCGTTCCAGATCTGGGGATGATCTGATTGATCGTGATCGACGTAGAGATAAGGGTTCTTCTCGGCACCGATCACGGTCCGGAGAAAGGAGTGATAGAGATGGGGAAAGGCATAAAAGTAGCAGAGAAAGAGAACATAGAGATAAGTATAGAGAAAGAGAGGAGAGGAATGGGAGGGACCGTGATCGGGAACGGGAACGGGAACGTGATCGTGAAAGGAAAGAACGTGGCCATGAGAAGGAAGTCGAGATCGACAGGAATGAACGCGAACACCGTAGCAGGAGTCGTTCAGATAGACATCGGGATGATAGGGAGAGGAGTCAAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTAAGGGAGATGAGCCGGGAAAGGGAATACAGAGAAAGGAGTCGGGATAGGGAGCGCAGAGAAAGGAGTCGAGACATTGAGCCACGTGACAAAGAAAGCCGGTATTCTTTCATTTTTCTTCAATTTTATATTTTCTTGTTTGGGTTTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186639.p1 GENE.S_Transcript_186639~~S_Transcript_186639.p1 ORF type:complete len:245 (-),score=55.45 S_Transcript_186639:243-977(-)
MDFDEYEYLEKTVENPEPQKSKEDANCGDAPLKSGEKDRSRSSWHRGEDDDVNRKPKRSRSGDDLIDRDRRRDKGSSRHRSRSGERSDRDGERHKSSREREHRDKYREREERNGRDRDRERERERDRERKERGHEKEVEIDRNEREHRSRSRSDRHRDDRERSQDREVRGKSRDREVRGKSRDREVRGKSRDREVREMSREREYRERSRDRERRERSRDIEPRDKESRYSFIFLQFYIFLFGFT*

Click here to download the sequence:
Link to NCBI Protein BLAST