Transcript Information: S_Transcript_186642.p1


Annotated TAIR IDAT2G16940.2
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7342869-7347052 | Reverse length=610
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5002720363114
Replicate 28.1665250899458
Replicate 310.845429876028
Condition 2: 8 Hour
Replicate 115.21423368894
Replicate 216.962535983554
Replicate 315.716460771434
Condition 3: 24 Hour
Replicate 115.584857176872
Replicate 212.109917230347
Replicate 312.347508305788


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186642.p1 GENE.S_Transcript_186642~~S_Transcript_186642.p1 ORF type:complete len:335 (-),score=63.61 S_Transcript_186642:124-1128(-)
ATGGATTTTGATGAGTATGAATACTTGGAAAAGACTGTTGAAAATCCCGAGCCCCAGAAATCGAAGGAAGATGCCAATTGTGGGGATGCACCTCTCAAATCAGGGGAAAAGGATAGAAGCCGAAGTTCTTGGCATAGGGGTGAGGATGATGATGTCAATCGAAAACCCAAGCGTTCCAGATCTGGGGATGATCTGATTGATCGTGATCGACGTAGAGATAAGGGTTCTTCTCGGCACCGATCACGGTCCGGAGAAAGGAGTGATAGAGATGGGGAAAGGCATAAAAGTAGCAGAGAAAGAGAACATAGAGATAAGTATAGAGAAAGAGAGGAGAGGAATGGGAGGGACCGTGATCGGGAACGGGAACGGGAACGTGATCGTGAAAGGAAAGAACGTGACCATGAGAAGGAAGTCGAGAGAGACAGGGATGAACGTGAACACCGTAGCAGGAGTCGTTCAGATAGACATCGGGATGATAGGGAGAGGAGGCGAGACAGGGAAGTTAGGGGAAAGAGCAGAGACAGGGAAGTAAGGGAGATGAGCCGGGAAAGGGAATACAGAGAAAGGAGTCGGGATAGGGAGCGCAGAGAAAGGAGTCGAGACATCGAGCTACGTGACAAAGAAAGCCGATATGCTAGAGCAATCTTCAGATGGTCATTCTGGCAAATGAGCCAGGCTCTGGAAACAGGTTATGGGTTTAATATATCCTTCCTAGACCCCTGGGCATTTGTGAGAAGTCTTGCCGTTGGGATTTCAATATTGGACGTTATTGGGGGGAGATGCCGTGTTACAATTTTCTTATCATCCCCTCTCTCAACACAGTCGTTTAATTACATTTATTGTGTTGCAGACATGCTGGTAAGAGAGTCTCAGGCTTTGCTTAGAAGAAGCACTTCATCTTCTGAATCTTGTGAGATTAGCAGTGTCCATTTGGCTAAGAGGATGGTCAAAGTCAAAACCATTTTGCAGGGCTATAATCTCATAACAAGCTGTTTAATGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186642.p1 GENE.S_Transcript_186642~~S_Transcript_186642.p1 ORF type:complete len:335 (-),score=63.61 S_Transcript_186642:124-1128(-)
MDFDEYEYLEKTVENPEPQKSKEDANCGDAPLKSGEKDRSRSSWHRGEDDDVNRKPKRSRSGDDLIDRDRRRDKGSSRHRSRSGERSDRDGERHKSSREREHRDKYREREERNGRDRDRERERERDRERKERDHEKEVERDRDEREHRSRSRSDRHRDDRERRRDREVRGKSRDREVREMSREREYRERSRDRERRERSRDIELRDKESRYARAIFRWSFWQMSQALETGYGFNISFLDPWAFVRSLAVGISILDVIGGRCRVTIFLSSPLSTQSFNYIYCVADMLVRESQALLRRSTSSSESCEISSVHLAKRMVKVKTILQGYNLITSCLMS*

Click here to download the sequence:
Link to NCBI Protein BLAST