Transcript Information: S_Transcript_186776.p1


Annotated TAIR IDAT1G18760.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6471150-6471824 | Reverse length=224
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.33266320036438
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186776.p1 GENE.S_Transcript_186776~~S_Transcript_186776.p1 ORF type:5prime_partial len:197 (+),score=13.86,zf-RING_2|PF13639.2|4.2e-13,zf-RING_11|PF17123.1|9.3e-10,zf-RING_11|PF17123.1|8e+03,zf-C3HC4_2|PF13923.2|1e-06,zf-rbx1|PF12678.3|9.8e-06,zf-C3HC4|PF00097.21|1e-05,zf-C3HC4_3|PF13920.2|1.2e-05 S_Transcript_186776:1-591(+)
CTCTCCTCATCATCCTCGACTGCACCTCCGCAGCCCTATCCGATGACATCACCCTCGCTTCAACGATCGATCCGATTCTCTCGCACCGGAGATCGATCTTCTTCGTCGGCGCCATTAATGGCGGAGGTGCTTCAAGAATTCGAGGTTCCGGAACAAGTTCAAGGAGACATGGTAGACCACTTGAAGTTCTACCTCGAGAGGATATCGAGGCGAAACCTTCGCCGAGAAGGAATCATTCGTGTCAACGTCACGGTCGACGCGAGGGTGATGTCATCGGATAGGGCTGCGGAGGTGCAGTCGAGGATGATGAGGAGAGAGAATCGTCAAAGTCAGGCGGTGAGGGTGGTGCCGGAGACGTCGATGACGCCATCATCGCCGGCGAAGAAGTCGGCGGTGGAGGCGCTGGTGAGGGAAAGGTTGAGGAGTGAAGGAGAAGAGGAGAGAGAATGTTCGATTTGTTTGGAAGGGTTTGGGTTAGGGGTTGAGGTGATTAGGATGCCCTGCTTGCATGTCTACCATAAGGAGTGCATCTTAAGGTGGCTTGAAAGAACTCATTTTTGCCCCTTTTGTAGATTCAAGCTACCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186776.p1 GENE.S_Transcript_186776~~S_Transcript_186776.p1 ORF type:5prime_partial len:197 (+),score=13.86,zf-RING_2|PF13639.2|4.2e-13,zf-RING_11|PF17123.1|9.3e-10,zf-RING_11|PF17123.1|8e+03,zf-C3HC4_2|PF13923.2|1e-06,zf-rbx1|PF12678.3|9.8e-06,zf-C3HC4|PF00097.21|1e-05,zf-C3HC4_3|PF13920.2|1.2e-05 S_Transcript_186776:1-591(+)
LSSSSSTAPPQPYPMTSPSLQRSIRFSRTGDRSSSSAPLMAEVLQEFEVPEQVQGDMVDHLKFYLERISRRNLRREGIIRVNVTVDARVMSSDRAAEVQSRMMRRENRQSQAVRVVPETSMTPSSPAKKSAVEALVRERLRSEGEEERECSICLEGFGLGVEVIRMPCLHVYHKECILRWLERTHFCPFCRFKLPC*

Click here to download the sequence:
Link to NCBI Protein BLAST