Transcript Information: S_Transcript_186777.p1


Annotated TAIR IDAT1G18760.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6471150-6471824 | Reverse length=224
E-Value7.8E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6504186812515
Replicate 22.0523525169781
Replicate 32.001537249383
Condition 2: 8 Hour
Replicate 11.3225048258687
Replicate 20.69370073301478
Replicate 31.3219130297663
Condition 3: 24 Hour
Replicate 10.93137100153696
Replicate 20.96628654007683
Replicate 30.48879931017667


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186777.p1 GENE.S_Transcript_186777~~S_Transcript_186777.p1 ORF type:complete len:258 (+),score=12.26,zf-RING_2|PF13639.2|6.5e-13,zf-RING_11|PF17123.1|1.4e-09,zf-C3HC4_2|PF13923.2|1.6e-06,zf-rbx1|PF12678.3|1.3e-05,zf-C3HC4|PF00097.21|1.5e-05 S_Transcript_186777:193-966(+)
ATGAATCTCAAATCTTTGTTTTATCAATGCGTATCTAGCAAGCAATCCAAGTATTTAACGGCGAAATCATCGTTTTGGCCGGAAAGTTTCACGATGAGATTACTGGCAGGTAATATCGTGTACAACTTCACCGTCACACATGACGAAACCCTAGATTCCACCACCGGAAACGAATATCAAATCACCGTACACTATCGCAAGTTCAATGGCGGCGGTGGTTCTTCATCACCGGAGACAGAGCTTCAACGATCGATCCGATTCTCTCGCACCGGAGATCGATCTTCTTCGTCGGCGCCATTAATGGCGGAGGTGCTTCAAGAATTCGAGGTTCCGGAACAAGTTCAAGGAGACATGGTAGACCACTTGAAGTTCTACCTCGAGAGGATATCGAGGCGAAACCTTCGCCGAGAAGGAATCATTCGTGTCAACGTCACGGTCGACGCGAGGGTGATGTCATCGGATAGGGCTGCGGAGGTGCAGTCGAGGATGATGAGGAGAGAGAATCGTCAAAGTCAGGCGGTGAGGGTGGTGCCGGAGACGACGATGACGTCATCATCGCCGGCGAAGAAGTCGGCGGTGGAGGCGCTGGTGAGGGAAAGGTTGAGGAGTGAAGGAGAAGAGGAGAGAGAATGTTCGATTTGTTTGGAAGGGTTTGGGTTAGGGGTTGAGGTGATTAGGATGCCCTGCTTGCATGTCTACCATAAGGAGTGCATCTTAAGGTGGCTTGAAAGAACTCATTTTTGCCCCTTTTGTAGATTCAAGCTACCTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186777.p1 GENE.S_Transcript_186777~~S_Transcript_186777.p1 ORF type:complete len:258 (+),score=12.26,zf-RING_2|PF13639.2|6.5e-13,zf-RING_11|PF17123.1|1.4e-09,zf-C3HC4_2|PF13923.2|1.6e-06,zf-rbx1|PF12678.3|1.3e-05,zf-C3HC4|PF00097.21|1.5e-05 S_Transcript_186777:193-966(+)
MNLKSLFYQCVSSKQSKYLTAKSSFWPESFTMRLLAGNIVYNFTVTHDETLDSTTGNEYQITVHYRKFNGGGGSSSPETELQRSIRFSRTGDRSSSSAPLMAEVLQEFEVPEQVQGDMVDHLKFYLERISRRNLRREGIIRVNVTVDARVMSSDRAAEVQSRMMRRENRQSQAVRVVPETTMTSSSPAKKSAVEALVRERLRSEGEEERECSICLEGFGLGVEVIRMPCLHVYHKECILRWLERTHFCPFCRFKLPC*

Click here to download the sequence:
Link to NCBI Protein BLAST