Transcript Information: S_Transcript_186942.p1


Annotated TAIR IDAT5G17570.1
Annotated Gene NameTatD related DNase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5792948-5794580 | Forward length=325
E-Value4.7E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8398019610711
Replicate 22.8251132969988
Replicate 31.8555191791427
Condition 2: 8 Hour
Replicate 13.1207888268975
Replicate 22.7964810799658
Replicate 33.4443290337317
Condition 3: 24 Hour
Replicate 12.5308096726908
Replicate 23.1093643930964
Replicate 31.9224119211216


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186942.p1 GENE.S_Transcript_186942~~S_Transcript_186942.p1 ORF type:complete len:328 (+),score=82.47,TatD_DNase|PF01026.17|4.2e-69 S_Transcript_186942:175-1158(+)
ATGAAACTCTTTGATGCTCATTGTCATCTACAAGATCCTAGAATATGTAACTTGGCACCTCAGTTAATCCGTTCATCACTTGATACTGGTGTTGTCTATTTTGCCGTTAATGGAATCTCGGAAAAAGACTGGCATTTGGTCAAGCAGATGGGTGGCTCTTATCCCTCGGTAATTCCTTGTTTTGGCATTCACCCTTGGTGTGTTACTGAAAGGACTCCAGGTTGGTTCAACACGTTGAGACAGTACTTTGATTCGACTCCCTCTGCTGCCGTTGGAGAGATTGGTCTGGACAAAGGGTCGAGGGGGAGGGAGATTGATTTTGGTGATCAAGTTGAAGTTTTCAAGCGTCAGTTAGAGCTAGCCAAAGTGCTTAAAAGACCAGCCTCTGTGCATTGTGTTCGTGCCTTTGGTGACCTTCTTGATGTAATGAAGGCCATTGGACCTTTTCCTGAAGGAGTGATTCTTCATTCGTACTTGGGGTCTGCTGAAATGGTCCCTGAATTTGCGAAGCTTGGTGCTTACTTTTCCTTCTCGGGATTTCTTATGTCAATGAAAGCACAGAAGTTGAAGAAGATGCTGAAGGCAGTCCCCTCTGATAGAATCCTGCTGGAGACTGATGCACCCGATGCTTTGCCTAAGTCAAATTTAGATTCCTTGTTCTTGGTGGAAAATGATCCGTCCCTTCCTCCAGAACTTCAGGCGCTAGGAGAAAACCCGGATTCAAGGGCCAAGGGGGAGATGCCAGATGCAGTGAAAAATGTGTTAGCATTGCCAAAAGAAATGTTAAATCATCCAGCTAATATTCATAGTGTACTTGTCTATGTAGCATCCATGCTTGAGATGAGAAGTAAAGAGCTTGCAGAACTAAGCTACTCAAATGCAGTGCGTCTGTTTTCTTATGAAGGCTCGAAGGTGCTTCAAGAAGGTAGCAACGCTGCTGATGCTTTAGAGGCATCAGTCAAGGGAGAAGACTCGAGTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186942.p1 GENE.S_Transcript_186942~~S_Transcript_186942.p1 ORF type:complete len:328 (+),score=82.47,TatD_DNase|PF01026.17|4.2e-69 S_Transcript_186942:175-1158(+)
MKLFDAHCHLQDPRICNLAPQLIRSSLDTGVVYFAVNGISEKDWHLVKQMGGSYPSVIPCFGIHPWCVTERTPGWFNTLRQYFDSTPSAAVGEIGLDKGSRGREIDFGDQVEVFKRQLELAKVLKRPASVHCVRAFGDLLDVMKAIGPFPEGVILHSYLGSAEMVPEFAKLGAYFSFSGFLMSMKAQKLKKMLKAVPSDRILLETDAPDALPKSNLDSLFLVENDPSLPPELQALGENPDSRAKGEMPDAVKNVLALPKEMLNHPANIHSVLVYVASMLEMRSKELAELSYSNAVRLFSYEGSKVLQEGSNAADALEASVKGEDSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST