Transcript Information: S_Transcript_186959.p1


Annotated TAIR IDAT3G02290.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:459385-460688 | Forward length=231
E-Value1.6E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.608838975908
Replicate 218.964610598374
Replicate 316.637702339248
Condition 2: 8 Hour
Replicate 127.496141557835
Replicate 224.466234469829
Replicate 323.94631390517
Condition 3: 24 Hour
Replicate 118.31251935169
Replicate 215.334238470805
Replicate 317.172455765185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_186959.p1 GENE.S_Transcript_186959~~S_Transcript_186959.p1 ORF type:complete len:235 (-),score=43.82,zf-rbx1|PF12678.3|9.6e-12,zf-RING_2|PF13639.2|2.1e+03,zf-RING_2|PF13639.2|3.9e-11,zf-ANAPC11|PF12861.3|1.6e+03,zf-ANAPC11|PF12861.3|2.8e-07,zf-C3HC4|PF00097.21|4.1e+03,zf-C3HC4|PF00097.21|8.5e-07,zf-RING_5|PF14634.2|1.1e+04,zf-RING_5|PF14634.2|1.9e+03,zf-RING_5|PF14634.2|1.7e-06,zf-RING_11|PF17123.1|2.9e+03,zf-RING_11|PF17123.1|3.2e-06,zf-RING_11|PF17123.1|2.3e+03 S_Transcript_186959:429-1133(-)
ATGAGTGAGGCTTCAGCTGCCATAATGGGTGGTGTTTGTTCCTGCTTGCATGTAGAGGATATTGAAGACTATGTGAACAGGAACAGTTCCATTTACAGGAACTGTGTGTGTCTCAACTGTTTCATTCAAAATTTCTTTCATGTGTATTATTCATTATTTCGGAGGGCGGAAGTTCAGGCCCTTCCTTCATCCATCCAAGGGGCATCGTTGAGTTCTACCGCATCGACAGACAACTCTCTAGCTGATATGTACCGTTCTCCCCCAAGACCCTTGCCTTATGATGCCGATCCTAGATATTATCGCATGCAGCGGGATGGATTGTTTTCTAGACGTGAAAAAGGATCAAGTCATTCACATGACGAATCAGAACCCCTTAGGAGAGGTGACATTGATGCTGATTCTGAATCGCTAAGTACAGGTGATAAGTGGAATGAGTCAGCTTGTGAAGATGGTTCAAAAGAGAATCGTAAATCATCGGTGAAGCTTTCAGCTGCTAAATCGACAACAGTAATGGGATATTTTTATTCCTCGTCAGAGGATGAAGATGTTTGTCCAACATGCCTTGAAGAGTACACTGAAGAGAACCCAAAGATAGTAACTAAGTGCTCTCATCATTTTCATCTGGGTTGCATATATGAGTGGATGGAGAGGAGTGAGAACTGCCCAGTCTGTGGGAAGGTGATGGCATTTGATGAGTCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_186959.p1 GENE.S_Transcript_186959~~S_Transcript_186959.p1 ORF type:complete len:235 (-),score=43.82,zf-rbx1|PF12678.3|9.6e-12,zf-RING_2|PF13639.2|2.1e+03,zf-RING_2|PF13639.2|3.9e-11,zf-ANAPC11|PF12861.3|1.6e+03,zf-ANAPC11|PF12861.3|2.8e-07,zf-C3HC4|PF00097.21|4.1e+03,zf-C3HC4|PF00097.21|8.5e-07,zf-RING_5|PF14634.2|1.1e+04,zf-RING_5|PF14634.2|1.9e+03,zf-RING_5|PF14634.2|1.7e-06,zf-RING_11|PF17123.1|2.9e+03,zf-RING_11|PF17123.1|3.2e-06,zf-RING_11|PF17123.1|2.3e+03 S_Transcript_186959:429-1133(-)
MSEASAAIMGGVCSCLHVEDIEDYVNRNSSIYRNCVCLNCFIQNFFHVYYSLFRRAEVQALPSSIQGASLSSTASTDNSLADMYRSPPRPLPYDADPRYYRMQRDGLFSRREKGSSHSHDESEPLRRGDIDADSESLSTGDKWNESACEDGSKENRKSSVKLSAAKSTTVMGYFYSSSEDEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSENCPVCGKVMAFDESP*

Click here to download the sequence:
Link to NCBI Protein BLAST